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PLM4_65_b1_redo_sep16_scaffold_6968

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_6968_1
Methylophaga lonarensis, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..169)
DNA (168bp) protein (56aa)
Phosphonoacetate hydrolase Tax=Methylophaga lonarensis MPL RepID=M7P3C9_9GAMM
Phosphonoacetate hydrolase {ECO:0000313|EMBL:EMR14026.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga lonarensis MPL.;"
PLM4_65_b1_redo_sep16_scaffold_6968_2
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

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comp(190..987)
DNA (798bp) protein (266aa)
Phosphate ABC transporter ATP-binding protein Tax=Methylophaga lonarensis MPL RepID=M7P3D4_9GAMM
phosphate ABC transporter ATPase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
PLM4_65_b1_redo_sep16_scaffold_6968_3
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

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comp(996..1859)
DNA (864bp) protein (288aa)
Phosphate ABC transporter permease Tax=Methylophaga lonarensis MPL RepID=M7NYW3_9GAMM
phosphate ABC transporter permease
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
PLM4_65_b1_redo_sep16_scaffold_6968_4
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

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comp(1846..2808)
DNA (963bp) protein (321aa)
Phosphate ABC transporter, inner membrane subunit PstC Tax=Methylophaga lonarensis MPL RepID=M7PU88_9GAMM
phosphate ABC transporter permease
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
PLM4_65_b1_redo_sep16_scaffold_6968_5
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

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comp(2805..3683)
DNA (879bp) protein (293aa)
Phosphate ABC transporter substrate-binding protein Tax=Methylophaga lonarensis MPL RepID=M7PJF1_9GAMM
phosphate binding protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
PLM4_65_b1_redo_sep16_scaffold_6968_6
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

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4347..5033
DNA (687bp) protein (229aa)
3-ketoacyl-ACP reductase Tax=Paenibacillus elgii RepID=UPI000248D3E8
short chain dehydrogenase family protein
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
PLM4_65_b1_redo_sep16_scaffold_6968_7
Fonsecaea multimorphosa, Fonsecaea, Chaetothyriales, Chaetothyriomycetidae, Ascomycota, Fungi

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5061..5939
DNA (879bp) protein (293aa)
Uncharacterized protein {ECO:0000313|EMBL:KIX97605.1}; species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Chaetothyriomycetidae; Chaetothyriales; Herpotrichiellaceae; Fonsecaea.;" source="Fonsecaea multimorphosa CBS 102226.;"
PLM4_65_b1_redo_sep16_scaffold_6968_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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6014..7003
DNA (990bp) protein (330aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Putative aliphatic sulfonates-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_6968_9
Gallibacterium genomosp. 2, Gallibacterium, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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7008..7799
DNA (792bp) protein (264aa)
kduD; 2-deoxy-D-gluconate 3-dehydrogenase (EC:1.1.1.125)
2-deoxy-D-gluconate 3-dehydrogenase Tax=Yersinia ruckeri ATCC 29473 RepID=C4UNC6_YERRU
2-deoxy-D-gluconate 3-dehydrogenase {ECO:0000313|EMBL:KGQ32602.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Gallibacterium.;" source="Gallibacterium genomosp. 2.;"
PLM4_65_b1_redo_sep16_scaffold_6968_10
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8229..9194)
DNA (966bp) protein (322aa)
4,5-dihydroxyphthalate decarboxylase bin=GWD2_Deltaproteobacteria_55_8 species=Burkholderia xenovorans genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
NMT1/THI5 like family protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_6968_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9199..10152)
DNA (954bp) protein (318aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000370DFBD
F420-dependent N5 N10-methylene tetrahydromethanopterin reductase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_6968_12
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10340..11359)
DNA (1020bp) protein (340aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_6968_13
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11408..12418)
DNA (1011bp) protein (337aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI00035CEBBB
Uncharacterized protein {ECO:0000313|EMBL:EWC59785.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
PLM4_65_b1_redo_sep16_scaffold_6968_14
unknown

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12663..13571
DNA (909bp) protein (303aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_6968_15
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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13595..14590
DNA (996bp) protein (332aa)
NMT1/THI5-like domain-containing protein bin=GWD2_Deltaproteobacteria_55_8 species=Brenneria sp. EniD312 genus=Brenneria taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
NMT1/THI5 like domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_6968_16
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14813..15928
DNA (1116bp) protein (372aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS23651.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
Displaying 16 items

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