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PLM4_65_b1_redo_sep16_scaffold_13842

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_13842_1
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..777)
DNA (777bp) protein (259aa)
Threonine--tRNA ligase bin=GWD2_Deltaproteobacteria_55_8 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
thrS; threonyl-tRNA ligase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_13842_trna_1
unknown

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comp(798..869)
DNA (72bp)
transferRNA Val
PLM4_65_b1_redo_sep16_scaffold_13842_2
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1024..1590)
DNA (567bp) protein (189aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase bin=GWC2_Nitrospirae_57_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_13842_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1612..2859)
DNA (1248bp) protein (416aa)
GTPase HflX Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CIJ0_DESK7
GTP-binding protein HflX
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_13842_4
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2901..6401)
DNA (3501bp) protein (1167aa)
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III, alpha subunit Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4G7_GEOUR
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_13842_5
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6464..6892)
DNA (429bp) protein (143aa)
NUDIX hydrolase bin=GWA2_Bacteroidetes_A19_40_15 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
NUDIX hydrolase
Tax=RBG_13_Bacteroidetes_42_15_curated
PLM4_65_b1_redo_sep16_scaffold_13842_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6949..7731)
DNA (783bp) protein (261aa)
hypothetical protein Tax=Gemmata obscuriglobus RepID=UPI00016C3DB7
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_13842_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7802..8191)
DNA (390bp) protein (130aa)
GMP synthase [glutamine-hydrolyzing] bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
GMP synthase, large subunit
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_13842_8
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8268..9233)
DNA (966bp) protein (322aa)
GMP synthase [glutamine-hydrolyzing] bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
guaA; GMP synthase
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_13842_9
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9230..10696)
DNA (1467bp) protein (489aa)
inosine-5-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_13842_10
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10867..11100
DNA (234bp) protein (78aa)
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_13842_11
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11242..12765
DNA (1524bp) protein (508aa)
Mg chelatase, subunit ChlI bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_13842_12
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13279..13497
DNA (219bp) protein (73aa)
antibiotic synthesis protein MbtH Tax=Rudanella lutea RepID=UPI00036BE73A
Antibiotic synthesis protein MbtH {ECO:0000313|EMBL:AKF81310.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
MbtH-like domain-containing protein
PLM4_65_b1_redo_sep16_scaffold_13842_13
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

13575..15329
DNA (1755bp) protein (585aa)
Amino acid adenylation domain protein Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TSW0_9CYAN
amino acid adenylation protein
Amino acid adenylation domain protein {ECO:0000313|EMBL:AFY85635.1}; species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
Displaying 14 items

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