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PLM4_65_b1_redo_sep16_scaffold_55684

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_55684_1
Leptospirillum sp. Group II '5-way CG', Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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1..312
DNA (312bp) protein (104aa)
Putative type III restriction-modification system, Res subunit bin=GWD2_Deltaproteobacteria_55_8 species=Leptospirillum sp. Group II '5-way CG' genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Putative type III restriction-modification system, Res subunit {ECO:0000313|EMBL:EDZ39901.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum sp. Group II '5-way CG'.;"
type III restriction-modification system, res subunit
PLM4_65_b1_redo_sep16_scaffold_55684_2
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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440..685
DNA (246bp) protein (82aa)
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PLM4_65_b1_redo_sep16_scaffold_55684_3
unknown

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710..871
DNA (162bp) protein (54aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_55684_4

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891..1007
DNA (117bp) protein (39aa)
DNA-binding protein (Fragment) Tax=mine drainage metagenome RepID=T0ZE58_9ZZZZ
DNA-binding protein {ECO:0000313|EMBL:EQD27079.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
PLM4_65_b1_redo_sep16_scaffold_55684_5
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1008..1259
DNA (252bp) protein (84aa)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI00037C7B60
cytochrome C
Cytochrome C {ECO:0000313|EMBL:AHL77322.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
PLM4_65_b1_redo_sep16_scaffold_55684_6
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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1374..2381
DNA (1008bp) protein (336aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1Z348_9BACT
filamentation induced by cAMP protein Fic
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_65_b1_redo_sep16_scaffold_55684_7
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2551..3081
DNA (531bp) protein (177aa)
Methyltransferase type 11 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QQH6_ACEAZ
methyltransferase type 11
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_65_b1_redo_sep16_scaffold_55684_8
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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3113..3463
DNA (351bp) protein (117aa)
DsrE family protein Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DYE4_THIND
ychN_[H]; DsrE family protein
DsrE family protein {ECO:0000313|EMBL:AGA33366.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 /; ALEN2).;"
PLM4_65_b1_redo_sep16_scaffold_55684_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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3475..3813
DNA (339bp) protein (113aa)
Uncharacterized protein bin=GWB2_Proteobacteria_55_19 species=Thermococcus sp. CL1 genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
type 11 methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Displaying 9 items

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