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PLM4_65_b1_redo_sep16_scaffold_966_28

Organism: PLM4_65_b1_sep16_Deltaproteobacteria_57_7

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: 29493..30116

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock protein DNA-binding protein bin=GWD2_Deltaproteobacteria_55_8 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 207.0
  • Bit_score: 227
  • Evalue 7.70e-57
sigma 54 modulation protein/ribosomal protein S30EA similarity KEGG
DB: KEGG
  • Identity: 52.5
  • Coverage: 204.0
  • Bit_score: 216
  • Evalue 5.10e-54
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.2
  • Coverage: 201.0
  • Bit_score: 253
  • Evalue 1.80e-64

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Taxonomy

RLO_Deltaproteobacteria_57_22 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
TTGAAAATTCCCTTAAAGATCACCTTTCGCGATGTCGCTCCCTCGAAAGCCATCGAGGACAACATCCGCGAGCGCGCAGCCAAGCTCGACGCGCTCTATGACGGTATCATGAGTTGCCGAGTCATCGTCGAAGCGCCGCACCGCCATCACCACAAGGGCAAAGCGTACATGGTCCGCATCGATATGGCCGTTCCCGGCGGCGAATTGGTGATCAACCGCGCGCCGCAACGCCTGGCGGCGGCCAAGGCGCCGCGCGCGGAAGAATTGGAGACAAATTTCGCCGAGAGTCATAAACCGAGCAAGCATGCCGCCCATGAAGACCTCTACGTCGCGATTCGTGACGCCTTCAATGCCGCCGGCCGCAAGTTGCAGGACTATACCCGCCGGCGGCGCGGCGAGATCAAGAACCATGAACCGGCCCCAACCGCCCGTGTCGCCCGGCTTTTCCCAAGCGACGAATATGGCTTTCTCGAAACACCGGATGGACGGCAAATTTATTTTCATAAAAATAGCGTGCTCCAGCCCGGCTTCGAGCGCTTGGAGGTCGGCACGGAGGTTTGTTATTCGGAGGAACTCGGTGAAAACGGGCCGCAGGCCAGCACCGTTCGAGTCGCGGGTCAGTAA
PROTEIN sequence
Length: 208
LKIPLKITFRDVAPSKAIEDNIRERAAKLDALYDGIMSCRVIVEAPHRHHHKGKAYMVRIDMAVPGGELVINRAPQRLAAAKAPRAEELETNFAESHKPSKHAAHEDLYVAIRDAFNAAGRKLQDYTRRRRGEIKNHEPAPTARVARLFPSDEYGFLETPDGRQIYFHKNSVLQPGFERLEVGTEVCYSEELGENGPQASTVRVAGQ*