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PLM4_90_b2_sep16_scaffold_366

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_366_1
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3..650
DNA (648bp) protein (216aa)
50S ribosomal protein L3 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfovibrio vulgaris genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
50S ribosomal protein L3
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_366_2
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


657..1280
DNA (624bp) protein (208aa)
50S ribosomal protein L4 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QKT1_DESB2
50S ribosomal protein L4
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_366_3
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1277..2362
DNA (1086bp) protein (362aa)
50S ribosomal protein L2 Tax=Pelobacter propionicus (strain DSM 2379) RepID=RL2_PELPD
rplB; 50S ribosomal protein L2
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_b2_sep16_scaffold_366_4
unknown

Not on your lists

2359..2613
DNA (255bp) protein (85aa)

This feature has no annotations

PLM4_90_b2_sep16_scaffold_366_5
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2646..3038
DNA (393bp) protein (131aa)
30S ribosomal protein S19 Tax=uncultured Desulfobacterium sp. RepID=E1YG85_9DELT
rpsS; 30S ribosomal protein S19
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_b2_sep16_scaffold_366_6
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3028..3306
DNA (279bp) protein (93aa)
50S ribosomal protein L22 Tax=Geobacter sulfurreducens RepID=RL22_GEOSL
rplV; 50S ribosomal protein L22
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_366_7
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3324..4001
DNA (678bp) protein (226aa)
30S ribosomal protein S3 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
30S ribosomal protein S3
Tax=RBG_16_Deltaproteobacteria_54_18_curated
PLM4_90_b2_sep16_scaffold_366_8
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4008..4421
DNA (414bp) protein (138aa)
50S ribosomal protein L16 Tax=Koribacter versatilis (strain Ellin345) RepID=RL16_KORVE
50S ribosomal protein L16
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_366_9
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4421..4645
DNA (225bp) protein (75aa)
50S ribosomal protein L29 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QDQ7_9FIRM
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_b2_sep16_scaffold_366_10
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4617..4880
DNA (264bp) protein (88aa)
30S ribosomal protein S17 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
30S ribosomal protein S17
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_366_11
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4890..5258
DNA (369bp) protein (123aa)
50S ribosomal protein L14 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rplN; 50S ribosomal protein L14
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_366_12
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5267..5590
DNA (324bp) protein (108aa)
50S ribosomal protein L24 bin=GWC2_Deltaproteobacteria_42_51 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
50S ribosomal protein L24
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_366_13
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5621..6151
DNA (531bp) protein (177aa)
50S ribosomal protein L5 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
rplE; 50S ribosomal protein L5
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_366_14
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6368..6766
DNA (399bp) protein (133aa)
30S ribosomal protein S8 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
rpsH; 30S ribosomal protein S8
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_366_15
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6785..7321
DNA (537bp) protein (179aa)
50S ribosomal protein L6 bin=GWC2_Methylomirabilis_70_16 species=Leptolyngbya sp. PCC 6406 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
50S ribosomal protein L6
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_366_16
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7333..7695
DNA (363bp) protein (121aa)
50S ribosomal protein L18 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M2F7_CLOCD
50S ribosomal protein L18
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_366_17
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8038..8220
DNA (183bp) protein (61aa)
50S ribosomal protein L30 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=RL30_DESOH
rpmD; 50S ribosomal protein L30
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_366_18
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8222..8665
DNA (444bp) protein (148aa)
50S ribosomal protein L15 Tax=delta proteobacterium NaphS2 RepID=D8EWM5_9DELT
50S ribosomal protein L15
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_366_19
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8662..9972
DNA (1311bp) protein (437aa)
Protein translocase subunit SecY Tax=Desulfococcus multivorans DSM 2059 RepID=S7T9D4_DESML
secY; preprotein translocase subunit SecY
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_366_20
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10004..10648
DNA (645bp) protein (215aa)
adenylate kinase (EC:2.7.4.3)
Adenylate kinase Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QKR1_DESB2
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_366_21
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10662..10889
DNA (228bp) protein (76aa)
Translation initiation factor IF-1 Tax=Leptospira RepID=IF1_LEPBJ
infA; translation initiation factor IF-1
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_366_22
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11043..11411
DNA (369bp) protein (123aa)
30S ribosomal protein S13 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NJB4_DESAR
30S ribosomal protein S13
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_366_23
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11424..11834
DNA (411bp) protein (137aa)
30S ribosomal protein S11 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AA61_THEID
30S ribosomal protein S11
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_366_24
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11836..12465
DNA (630bp) protein (210aa)
30S ribosomal protein S4 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=RS4_PELCD
rpsD; 30S ribosomal protein S4
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_366_25
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12501..13523
DNA (1023bp) protein (341aa)
DNA-directed RNA polymerase subunit alpha Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=RPOA_SYNFM
DNA-directed RNA polymerase subunit alpha
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_366_26
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13536..13961
DNA (426bp) protein (142aa)
50S ribosomal protein L17 Tax=Geobacter sp. (strain M21) RepID=RL17_GEOSM
50S ribosomal protein L17
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_366_27
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13956..14438)
DNA (483bp) protein (161aa)
hypothetical protein; K09129 hypothetical protein bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_366_28
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14462..14773)
DNA (312bp) protein (104aa)
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_366_29
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14806..15483)
DNA (678bp) protein (226aa)
Kef-type K+ transport systems protein Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TK72_9DELT
DHH domain-containing protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_366_30
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15527..16507)
DNA (981bp) protein (327aa)
Uncharacterized protein Tax=Desulfovibrio piezophilus (strain DSM 21447 / JCM 15486 / C1TLV30) RepID=M1WNL0_DESPC
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
Displaying items 1-30 of 35 in total

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