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PLM4_90_b2_sep16_scaffold_443

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_443_1
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..857)
DNA (855bp) protein (285aa)
lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LVM0_SYNAS
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_443_2
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1208..1429
DNA (222bp) protein (74aa)
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_443_3
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1506..1979
DNA (474bp) protein (158aa)
mgsA; methylglyoxal synthase (EC:4.2.3.3); K01734 methylglyoxal synthase [EC:4.2.3.3] bin=bin5_DeltaP species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin5_DeltaP organism_group=Deltaproteobacteria
mgsA; methylglyoxal synthase (EC:4.2.3.3)
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_443_trna_2
unknown

Not on your lists

comp(2084..2156)
DNA (73bp)
transferRNA Ala
PLM4_90_b2_sep16_scaffold_443_4
unknown

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comp(2689..3177)
DNA (489bp) protein (163aa)

This feature has no annotations

PLM4_90_b2_sep16_scaffold_443_5
RLO_RIF02_62_27, RIF2, Bacteria

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comp(3757..4389)
DNA (633bp) protein (211aa)
Putative uncharacterized protein bin=GWB2_Nitrospirae_rel_47_37 species=Thermoplasmatales archaeon SCGC AB-540-F20 genus=unknown taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
PLM4_90_b2_sep16_scaffold_443_trna_1
unknown

Not on your lists

4789..4873
DNA (85bp)
transferRNA Leu
PLM4_90_b2_sep16_scaffold_443_6
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5014..6045
DNA (1032bp) protein (344aa)
Molybdenum cofactor biosynthesis protein A (Fragment) bin=GWC2_Deltaproteobacteria_55_46 species=Heliobacillus mobilis genus=Heliobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
molybdenum cofactor biosynthesis protein A
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_443_7
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6049..6555
DNA (507bp) protein (169aa)
Cyclic pyranopterin monophosphate synthase accessory protein Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LSL0_THEPS
moaC2; molybdenum cofactor biosynthesis protein C
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_b2_sep16_scaffold_443_8
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7156..7575
DNA (420bp) protein (140aa)
Uncharacterized protein Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D4T8_PELTS
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_443_9
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7670..8278)
DNA (609bp) protein (203aa)
Dolichol kinase Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AM97_IGNAJ
Cytidylyltransferase family protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_443_10
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8275..8994)
DNA (720bp) protein (240aa)
Pseudouridine synthase Tax=Paenibacillus vortex V453 RepID=E5YVS2_9BACL
pseudouridine synthase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_443_11
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8997..9575)
DNA (579bp) protein (193aa)
Chromosome segregation and condensation protein ScpB Tax=Geobacter metallireducens RepID=Q39U87_GEOMG
scpB; chromosome segregation and condensation protein ScpB
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_443_12
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9592..10515)
DNA (924bp) protein (308aa)
tRNA dimethylallyltransferase Tax=Geobacter metallireducens RepID=MIAA_GEOMG
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_443_13
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10699..10884
DNA (186bp) protein (62aa)
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_b2_sep16_scaffold_443_14
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11275..11544
DNA (270bp) protein (90aa)
Cell shape determining protein, MreB/Mrl family Tax=Desulfovibrio sp. U5L RepID=I2PXZ8_9DELT
MreB/Mrl family cell shape determining protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
Displaying 16 items

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