ggKbase home page

PLM4_90_b2_sep16_scaffold_2352

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_2352_1
RHI_OP11_Daviesbacteria_43_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

2..979
DNA (978bp) protein (326aa)
MshQ-like protein bin=GWA2_Planctomycete_KSU_39_15 species=Marinobacter adhaerens genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_43_11_curated
PLM4_90_b2_sep16_scaffold_2352_2
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1280..1882)
DNA (603bp) protein (201aa)
DNA-binding helix-turn-helix protein Tax=Bacteriovorax sp. BAL6_X RepID=T0DEG8_9DELT
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_2352_3
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1867..2799)
DNA (933bp) protein (311aa)
MinD-related ATP-binding protein bin=GWC2_Nitrospirae_57_13 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
ATP-binding protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_2352_4
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2816..3826)
DNA (1011bp) protein (337aa)
Uncharacterized protein bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
radical SAM domain-containing protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_2352_5
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3950..4735
DNA (786bp) protein (262aa)
MazG family protein bin=GWC2_Nitrospirae-rel_56_14 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
mazG; nucleoside triphosphate pyrophosphohydrolase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_2352_6
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4728..5420
DNA (693bp) protein (231aa)
Ribosomal RNA small subunit methyltransferase I bin=GWD2_Nitrospirae-related_57_8 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
uroporphyrin-III C/tetrapyrrole methyltransferase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_2352_7
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5413..5529
DNA (117bp) protein (39aa)
Tax=RBG_16_Deltaproteobacteria_54_11_curated
Displaying 7 items

View Taxonomy