ggKbase home page

PLM4_90_b2_sep16_scaffold_1010

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_1010_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..344)
DNA (342bp) protein (114aa)
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit Tax=delta proteobacterium NaphS2 RepID=D8F106_9DELT
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_1010_2
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(432..1448)
DNA (1017bp) protein (339aa)
Phenylalanine--tRNA ligase alpha subunit Tax=Geobacter metallireducens RepID=SYFA_GEOMG
phenylalanyl-tRNA synthetase alpha chain
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_1010_3
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1474..1785)
DNA (312bp) protein (104aa)
50S ribosomal protein L20 Tax=Geobacter metallireducens RepID=RL20_GEOMG
rplT; 50S ribosomal protein L20
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_1010_4
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2301..2831)
DNA (531bp) protein (177aa)
Translation initiation factor IF-3 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CQH3_DESK7
Translation initiation factor IF-3
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_1010_5
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2979..4886)
DNA (1908bp) protein (636aa)
threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LR22_SYNAS
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_1010_trna_1
unknown

Not on your lists

comp(5029..5100)
DNA (72bp)
transferRNA Val
PLM4_90_b2_sep16_scaffold_1010_6
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5208..7799)
DNA (2592bp) protein (864aa)
Chaperone bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
ATP-dependent chaperone ClpB
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_1010_7
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8116..8250)
DNA (135bp) protein (45aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
Displaying 8 items

View Taxonomy