ggKbase home page

PLM4_90_b2_sep16_scaffold_1442

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_1442_1
unknown

Not on your lists

100..369
DNA (270bp) protein (90aa)

This feature has no annotations

PLM4_90_b2_sep16_scaffold_1442_2
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

332..1720
DNA (1389bp) protein (463aa)
Putative transport protein Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=C6A2D6_THESM
transport protein
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM4_90_b2_sep16_scaffold_1442_3
unknown

Not on your lists

comp(2164..2541)
DNA (378bp) protein (126aa)

This feature has no annotations

PLM4_90_b2_sep16_scaffold_1442_4
unknown

Not on your lists

comp(2745..2984)
DNA (240bp) protein (80aa)

This feature has no annotations

PLM4_90_b2_sep16_scaffold_1442_5

Not on your lists

3150..5144
DNA (1995bp) protein (665aa)
cya-5; adenylate cyclase 5 (EC:4.6.1.1)
Adenylate/guanylate cyclase bin=GWC2_Methylomirabilis_70_16 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Adenylate/guanylate cyclase {ECO:0000313|EMBL:EFK96915.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
PLM4_90_b2_sep16_scaffold_1442_6
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5267..5983)
DNA (717bp) protein (239aa)
Amidohydrolase Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LXX8_SYNAS
amidohydrolase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_1442_7
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6191..6706)
DNA (516bp) protein (172aa)
apurinic endonuclease Apn1 (EC:3.1.21.2)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00035EBFBF
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_1442_8
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7021..7836)
DNA (816bp) protein (272aa)
formate dehydrogenase subunit alpha Tax=Moorella thermoacetica RepID=UPI00015294F8
fdhA; formate dehydrogenase subunit alpha
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_1442_9
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7833..8456)
DNA (624bp) protein (208aa)
formate dehydrogenase subunit alpha Tax=Moorella thermoacetica RepID=UPI00015294F8
fdhA; formate dehydrogenase subunit alpha
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_1442_10
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8484..9533)
DNA (1050bp) protein (350aa)
Formate dehydrogenase, alpha subunit Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A3S3_NATTJ
formate dehydrogenase subunit alpha
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM4_90_b2_sep16_scaffold_1442_11
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9566..10141)
DNA (576bp) protein (192aa)
Glutamate synthase (NADPH) bin=GWC2_Syntrophobacterales_56_13 species=Thermoplasmatales archaeon SCGC AB-540-F20 genus=unknown taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
respiratory-chain NADH dehydrogenase, 51 kDa subunit
Tax=RBG_16_Deltaproteobacteria_48_10_curated
Displaying 11 items

View Taxonomy