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PLM4_90_b2_sep16_scaffold_4656

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_4656_1
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1..450
DNA (450bp) protein (150aa)
Homoserine dehydrogenase bin=GWC2_Nitrospirae_57_13 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
homoserine dehydrogenase
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_4656_2
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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552..1604
DNA (1053bp) protein (351aa)
L-threonine synthase (EC:4.2.3.1)
Threonine synthase Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C4B4_DESTA
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_4656_3
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1829..2956
DNA (1128bp) protein (376aa)
Histone deacetylase superfamily protein Tax=uncultured Acidobacteria bacterium RepID=H5SIW1_9BACT
histone deacetylase/AcuC/AphA family protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_4656_4
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3079..3624
DNA (546bp) protein (182aa)
Proposed homoserine kinase Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YGY3_THEYD
homoserine kinase
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_4656_5
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3639..4415
DNA (777bp) protein (259aa)
Cofactor-independent phosphoglycerate mutase/phosphopentomutase bin=GWC2_Deltaproteobacteria_42_51 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
cofactor-independent phosphoglycerate mutase
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_4656_6
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4434..6014
DNA (1581bp) protein (527aa)
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_4656_7
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6038..7006
DNA (969bp) protein (323aa)
KpsF/GutQ family protein (EC:5.3.1.13)
KpsF/GutQ family protein Tax=Geobacter sp. (strain M18) RepID=E8WQJ1_GEOS8
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_4656_8
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7106..7681
DNA (576bp) protein (192aa)
Lipopolysaccharide ABC transporter, periplasmic protein LptC bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_4656_9
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7678..8265
DNA (588bp) protein (196aa)
Lipopolysaccharide transport periplasmic protein LptA bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
lptA; lipopolysaccharide ABC transporter periplasmic protein LptA
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_4656_10
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8360..8635
DNA (276bp) protein (92aa)
ABC transporter ATP-binding protein Tax=Lewinella cohaerens RepID=UPI00036C7A80
Fe(3+)-transporting ATPase
Tax=RBG_16_Deltaproteobacteria_48_10_curated
Displaying 10 items

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