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PLM4_90_b2_sep16_scaffold_3029

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_3029_1
unknown

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2..199
DNA (198bp) protein (66aa)

This feature has no annotations

PLM4_90_b2_sep16_scaffold_3029_2
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(206..1219)
DNA (1014bp) protein (338aa)
Polyprenyl synthetase Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M5D6_GEODF
polyprenyl synthetase
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b2_sep16_scaffold_3029_3
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1275..1994)
DNA (720bp) protein (240aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000369C626
methyltransferase type 11
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_3029_4
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2365..3162
DNA (798bp) protein (266aa)
LysM domain protein bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
peptidoglycan-binding LysM
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_3029_5
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3377..4477
DNA (1101bp) protein (367aa)
SMF family protein involved in DNA uptake; K04096 DNA processing protein bin=bin1_lowGC species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin1_lowGC organism_group=Unknown_CP
DNA polymerase
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b2_sep16_scaffold_3029_6
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4581..6704
DNA (2124bp) protein (708aa)
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_3029_7
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6890..8206)
DNA (1317bp) protein (439aa)
Uncharacterized protein Tax=Sorangium cellulosum (strain So ce56) RepID=A9FYL1_SORC5
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_3029_8
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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8324..8869
DNA (546bp) protein (182aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO Tax=Clostridium thermocellum RepID=TRMFO_CLOTH
tRNA (uracil-5-)-methyltransferase Gid
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_3029_9
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8830..9561
DNA (732bp) protein (244aa)
methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase (EC:2.1.1.74)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C1X2_THEGP
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_3029_10
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9594..9905
DNA (312bp) protein (104aa)
id=15192281 bin=GWC2_NOV_55_46 tax=GWC2_NOV_55_46 organism_group=Proteobacteria
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_3029_11
unknown

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comp(9939..10214)
DNA (276bp) protein (92aa)

This feature has no annotations

Displaying 11 items

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