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PLM4_90_b2_sep16_scaffold_315

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_315_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..252)
DNA (252bp) protein (84aa)
Possible pectin degradation protein bin=GWC2_Syntrophus__56_31 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
cupin 2 barrel domain-containing protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_315_2
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(267..608)
DNA (342bp) protein (114aa)
Integral membrane protein bin=GWA2_Deltaproteo_65_63 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_315_3
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1045..1779)
DNA (735bp) protein (245aa)
Hypothetical cytosolic protein bin=GWC2_Proteo_65_14_Ab886 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
cytoplasmic protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_315_4
unknown

Not on your lists

1790..1915
DNA (126bp) protein (42aa)

This feature has no annotations

PLM4_90_b2_sep16_scaffold_315_5
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2192..2719
DNA (528bp) protein (176aa)
BioY protein Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LJ34_SYNFM
BioY protein
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM4_90_b2_sep16_scaffold_315_6
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2737..3483
DNA (747bp) protein (249aa)
Cobalt ABC transporter, ATPase subunit Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LJ35_SYNFM
cobalt ABC transporter ATPase
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM4_90_b2_sep16_scaffold_315_7
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3555..4229
DNA (675bp) protein (225aa)
Cobalt transport protein Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LJ36_SYNFM
cobalt transport protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_315_8
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4793..5149)
DNA (357bp) protein (119aa)
6-o-methylguanine DNA methyltransferase Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LRJ6_SYNAS
6-O-methylguanine-DNA methyltransferase
6-O-methylguanine-DNA methyltransferase {ECO:0000313|EMBL:BAP55181.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
PLM4_90_b2_sep16_scaffold_315_9
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5346..5996)
DNA (651bp) protein (217aa)
Predicted metal-dependent Hydrolase related to alanyl-tRNA synthetase HxxxH domain Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SNZ8_HAHCH
alanyl-tRNA synthetase
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_315_10
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6400..6633)
DNA (234bp) protein (78aa)
antitoxin of toxin-antitoxin (TA) system Tax=Aminicenantes RepID=UPI0003B708DF
DNA-binding domain-containing protein
Tax=RBG_16_Deltaproteobacteria_54_18_curated
PLM4_90_b2_sep16_scaffold_315_11
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6848..7531)
DNA (684bp) protein (228aa)
Zn-dependent hydrolase including glyoxylases bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Zn-dependent hydrolase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_315_12
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7528..7863)
DNA (336bp) protein (112aa)
Fe-S oxidoreductase Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LTL5_SYNAS
Fe-S oxidoreductase
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_315_13
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7892..8041)
DNA (150bp) protein (50aa)
radical SAM protein Tax=Desulfospira joergensenii RepID=UPI0003B537B1
putative methyltransferase
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM4_90_b2_sep16_scaffold_315_14
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8106..9554)
DNA (1449bp) protein (483aa)
tRNA modification GTPase MnmE Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R5U2_9THEO
tRNA modification GTPase TrmE
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_315_15
unknown

Not on your lists

9676..9966
DNA (291bp) protein (97aa)

This feature has no annotations

PLM4_90_b2_sep16_scaffold_315_16
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10022..11764)
DNA (1743bp) protein (581aa)
Membrane protein insertase YidC Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NGV7_DESAR
membrane protein OxaA
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_315_17
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11790..12044)
DNA (255bp) protein (85aa)
Putative membrane protein insertion efficiency factor Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WG64_FUSMR
hypothetical protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_315_18
unknown

Not on your lists

12146..12565
DNA (420bp) protein (140aa)

This feature has no annotations

PLM4_90_b2_sep16_scaffold_315_19
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12679..15105
DNA (2427bp) protein (809aa)
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_315_20
unknown

Not on your lists

15147..15257
DNA (111bp) protein (37aa)

This feature has no annotations

PLM4_90_b2_sep16_scaffold_315_21
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15353..16690
DNA (1338bp) protein (446aa)
Chromosomal replication initiator protein DnaA Tax=Geobacter uraniireducens (strain Rf4) RepID=DNAA_GEOUR
dnaA; chromosomal replication initiation protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_315_22
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16904..18031
DNA (1128bp) protein (376aa)
DNA polymerase III subunit beta bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
DNA polymerase III subunit beta
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_315_23
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18084..18449
DNA (366bp) protein (122aa)
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X5Q7_DESRD
Tax=RBG_13_Deltaproteobacteria_47_9_curated
Displaying 23 items

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