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PLM4_90_b2_sep16_scaffold_631

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_631_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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628..1791
DNA (1164bp) protein (388aa)
Putative DNA recombination protein bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_631_2
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

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1788..2201
DNA (414bp) protein (138aa)
Nitroreductase Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A840_THEID
nitroreductase
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
PLM4_90_b2_sep16_scaffold_631_3
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2346..2915
DNA (570bp) protein (190aa)
Metal dependent phosphohydrolase Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A9U9_THEID
metal dependent phosphohydrolase
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b2_sep16_scaffold_631_4
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3302..4453
DNA (1152bp) protein (384aa)
coproporphyrinogen oxidase (NAD) (EC:1.-.-.-)
Coproporphyrinogen oxidase (NAD) Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUT6_SYNAS
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM4_90_b2_sep16_scaffold_631_5
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4952..5224
DNA (273bp) protein (91aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2ARB3_9BACT
histone family protein DNA-binding protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_631_6
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5812..7728
DNA (1917bp) protein (639aa)
Selenocysteine-specific translation elongation factor SelB Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LHL0_SYNFM
selenocysteine-specific translation elongation factor
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_631_7
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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7866..8570
DNA (705bp) protein (235aa)
TPR repeat-containing protein Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FEY2_DESAA
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM4_90_b2_sep16_scaffold_631_8
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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8896..10722
DNA (1827bp) protein (609aa)
Indolepyruvate oxidoreductase subunit IorA Tax=Smithella sp. ME-1 RepID=V4FBF6_9DELT
indolepyruvate ferredoxin oxidoreductase subunit alpha
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM4_90_b2_sep16_scaffold_631_9
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10752..11270
DNA (519bp) protein (173aa)
indolepyruvate oxidoreductase subunit beta (EC:1.2.7.8)
Indolepyruvate ferredoxin oxidoreductase Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E1S3_GEOLS
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM4_90_b2_sep16_scaffold_631_10
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11468..14122
DNA (2655bp) protein (885aa)
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-] bin=bin1_lowGC species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin1_lowGC organism_group=Unknown_CP
peptidase M16 domain-containing protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_631_11
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14119..14943
DNA (825bp) protein (275aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Similar to 8-oxoguanine glycosylase (Hogg1) bin=GWA2_Planctomycete_KSU_39_15 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_631_12
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15090..16430)
DNA (1341bp) protein (447aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1YF34_9BACT
lipopolysaccharide biosynthesis protein
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b2_sep16_scaffold_631_13
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16564..17715)
DNA (1152bp) protein (384aa)
DegT/DnrJ/EryC1/StrS aminotransferase bin=GWF2_Lentisphaerae_57_35 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
pleiotropic regulatory protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_631_14
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17823..18548
DNA (726bp) protein (242aa)
tRNA (2'O-methyl-C32/U32)-methyltransferase Tax=Geobacter sulfurreducens RepID=D7AIR0_GEOSK
trmJ; tRNA (2'O-methyl-C32/U32)-methyltransferase
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_631_15
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18644..19399)
DNA (756bp) protein (252aa)
Band 7 protein Tax=Caldithrix abyssi DSM 13497 RepID=H1XWH8_9BACT
membrane protein
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM4_90_b2_sep16_scaffold_631_16
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19412..20707)
DNA (1296bp) protein (432aa)
Membrane-bound serine protease bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
membrane-bound serine protease
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_631_17
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21062..21652)
DNA (591bp) protein (197aa)
hypothetical protein Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI00037A300D
beta-lactamase domain-containing protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
Displaying 17 items

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