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PLM4_90_b2_sep16_scaffold_1232

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_1232_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3..230
DNA (228bp) protein (76aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PHD7_9BACT
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_1232_2
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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312..1040
DNA (729bp) protein (243aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60); K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] bin=bin1_lowGC species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_1232_3
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1037..1531
DNA (495bp) protein (165aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Tax=Peptostreptococcaceae bacterium oral taxon 113 str. W5053 RepID=U2JJH5_9FIRM
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_1232_4
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1604..3049
DNA (1446bp) protein (482aa)
Glutamate--tRNA ligase Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T5J9_THEA1
glutamyl-tRNA synthetase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_1232_5
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3174..4649
DNA (1476bp) protein (492aa)
Cysteine--tRNA ligase Tax=Geobacter metallireducens RepID=SYC_GEOMG
cysS; cysteinyl-tRNA ligase
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_1232_6
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4774..4893)
DNA (120bp) protein (40aa)
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_1232_7
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5357..6889
DNA (1533bp) protein (511aa)
Mg chelatase-related chaperone ATPase; K07391 magnesium chelatase family protein bin=bin1_lowGC species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
ATP-dependent protease
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b2_sep16_scaffold_1232_8
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6934..7206)
DNA (273bp) protein (91aa)
Toxin of the YafQ-DinJ toxin-antitoxin system Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLB6_9BACT
yafQ; toxin of the YafQ-DinJ toxin-antitoxin system
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_1232_9
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7206..7466)
DNA (261bp) protein (87aa)
Antitoxin of YafQ-DinJ toxin-antitoxin system Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLB7_9BACT
dinJ; antitoxin of YafQ-DinJ toxin-antitoxin system
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_b2_sep16_scaffold_1232_10
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

comp(7647..8492)
DNA (846bp) protein (282aa)
hypothetical protein Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI00035ED863
NAD-dependent epimerase/dehydratase
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
Displaying 10 items

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