ggKbase home page

PLM4_90_b2_sep16_scaffold_1300

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_1300_1
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

172..1806
DNA (1635bp) protein (545aa)
Virulence factor protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LU54_SYNAS
virulence factor protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_1300_2
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1865..2101
DNA (237bp) protein (79aa)
Glycine/D-amino acid oxidases (Deaminating) Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LGR5_9BACT
FAD dependent oxidoreductase
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_1300_3
unknown

Not on your lists

comp(2091..2261)
DNA (171bp) protein (57aa)

This feature has no annotations

PLM4_90_b2_sep16_scaffold_1300_4
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2468..3307
DNA (840bp) protein (280aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein Tax=delta proteobacterium NaphS2 RepID=D8EWA7_9DELT
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_1300_5
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists


3400..3591
DNA (192bp) protein (64aa)
50S ribosomal protein L28 Tax=Geobacter uraniireducens (strain Rf4) RepID=RL28_GEOUR
rpmB; 50S ribosomal protein L28
Tax=RBG_13_Nitrospirae_39_12_curated
PLM4_90_b2_sep16_scaffold_1300_6
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3653..5824)
DNA (2172bp) protein (724aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(P)ppGpp synthetase I, SpoT/RelA Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M903_GEODF
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_1300_7
unknown

Not on your lists

comp(5818..6225)
DNA (408bp) protein (136aa)

This feature has no annotations

PLM4_90_b2_sep16_scaffold_1300_8
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6400..7422
DNA (1023bp) protein (341aa)
Secretion protein HlyD family protein Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NIW5_DESAR
secretion protein HlyD family protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_1300_9
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7570..8493
DNA (924bp) protein (308aa)
ABC transporter related protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAP0_GEOUR
ABC transporter-like protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_1300_10
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8564..9505
DNA (942bp) protein (314aa)
ABC-type multidrug transport system, ATPase component Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CE39_DESTA
ABC-type multidrug transport system, ATPase component
Tax=RBG_16_Deltaproteobacteria_50_11_curated
PLM4_90_b2_sep16_scaffold_1300_11
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9502..10635
DNA (1134bp) protein (378aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IR11_9PLAN
ABC-2 type transporter
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_1300_12
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10696..11826
DNA (1131bp) protein (377aa)
Uncharacterized protein Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q5I4_9BACT
ABC transporter
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_1300_13
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12060..12707
DNA (648bp) protein (216aa)
Putative uncharacterized protein bin=GWC2_OP3-like_45_7 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
hypothetical protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_1300_14
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12887..13198
DNA (312bp) protein (104aa)
PP-loop domain protein Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LIP8_SYNFM
PP-loop domain-containing protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
Displaying 14 items

View Taxonomy