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PLM4_90_b2_sep16_scaffold_2333

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_2333_1
unknown

Not on your lists

1..141
DNA (141bp) protein (47aa)

This feature has no annotations

PLM4_90_b2_sep16_scaffold_2333_2
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(170..931)
DNA (762bp) protein (254aa)
Peptidase M23B bin=GWC2_Deltaproteobacteria_56_8 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
cell wall endopeptidase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_2333_3
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(912..1559)
DNA (648bp) protein (216aa)
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase 2 Tax=Geobacter uraniireducens (strain Rf4) RepID=PIMT2_GEOUR
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_2333_4
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1626..2888)
DNA (1263bp) protein (421aa)
mutS-1; DNA mismatch repair protein MutS
DNA mismatch repair protein MutS bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b2_sep16_scaffold_2333_5
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2866..3876)
DNA (1011bp) protein (337aa)
DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS bin=bin1_lowGC species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
mutS-1; DNA mismatch repair protein MutS
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b2_sep16_scaffold_2333_6
unknown

Not on your lists

4005..4190
DNA (186bp) protein (62aa)

This feature has no annotations

PLM4_90_b2_sep16_scaffold_2333_7
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4135..5175)
DNA (1041bp) protein (347aa)
N-acetyl-gamma-glutamyl-phosphate reductase bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
argC; N-acetyl-gamma-glutamyl-phosphate reductase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_2333_8
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5337..5726)
DNA (390bp) protein (130aa)
30S ribosomal protein S9 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=RS9_SYNFM
30S ribosomal protein S9
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b2_sep16_scaffold_2333_9
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5889..6329)
DNA (441bp) protein (147aa)
50S ribosomal protein L13 Tax=Syntrophus aciditrophicus (strain SB) RepID=RL13_SYNAS
rplM; 50S ribosomal protein L13
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b2_sep16_scaffold_2333_10
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6535..7449)
DNA (915bp) protein (305aa)
Protein-export membrane protein SecF Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LVH3_SYNAS
secF; preprotein translocase subunit SecF
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b2_sep16_scaffold_2333_11
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7471..9069)
DNA (1599bp) protein (533aa)
Protein translocase subunit SecD Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LVH4_SYNAS
protein translocase subunit
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b2_sep16_scaffold_2333_12
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9304..10959)
DNA (1656bp) protein (552aa)
AMP-binding enzyme Tax=delta proteobacterium NaphS2 RepID=D8F0S7_9DELT
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
Tax=RBG_13_Deltaproteobacteria_53_10_curated
PLM4_90_b2_sep16_scaffold_2333_13
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11106..11525
DNA (420bp) protein (140aa)
Glycine cleavage system H protein Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C028_DESTA
glycine cleavage system H protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
Displaying 13 items

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