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PLM4_90_coex_sep16_scaffold_8887

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_coex_sep16_scaffold_8887_1
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..351)
DNA (351bp) protein (117aa)
aroK; shikimate kinase AroK (EC:2.7.1.71)
Shikimate kinase bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_8887_2
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(348..1613)
DNA (1266bp) protein (422aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_8887_3
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1603..2412)
DNA (810bp) protein (270aa)
shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_8887_4
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2420..3124)
DNA (705bp) protein (235aa)
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase bin=GWC2_Syntrophus__56_31 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_8887_5
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3124..4203)
DNA (1080bp) protein (360aa)
pheA; bifunctional chorismate mutase/prephenate dehydratase (EC:4.2.1.51 5.4.99.5)
Chorismate mutase bin=GWC2_Syntrophus__56_31 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_8887_6
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4200..4880)
DNA (681bp) protein (227aa)
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_8887_7
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5176..6204)
DNA (1029bp) protein (343aa)
phospho-2-dehydro-3-deoxyheptanoate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptanoate aldolase Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUE1_SYNAS
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_8887_8
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6534..7298)
DNA (765bp) protein (255aa)
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C846_DESTA
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
Tax=RBG_16_Deltaproteobacteria_54_18_curated
PLM4_90_coex_sep16_scaffold_8887_9
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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7635..8867
DNA (1233bp) protein (411aa)
Geranylgeranyl reductase Tax=Methanolobus psychrophilus R15 RepID=K4MAW7_9EURY
geranylgeranyl reductase
Tax=RBG_16_Deltaproteobacteria_54_18_curated
PLM4_90_coex_sep16_scaffold_8887_10
GWD2_Desulfuromonadales_61_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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9337..9792
DNA (456bp) protein (152aa)
Putative outer membrane adhesin like proteiin Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LKT8_SYNFM
putative outer membrane adhesin-like protein
Tax=GWD2_Desulfuromonadales_61_12_curated
Displaying 10 items

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