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PLM4_90_coex_sep16_scaffold_277

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_coex_sep16_scaffold_277_1
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..416
DNA (414bp) protein (138aa)
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_277_2
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(772..1092)
DNA (321bp) protein (107aa)
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQW4_ARCVS
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_277_3
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1089..1793)
DNA (705bp) protein (235aa)
nitroreductase Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B4915F
SagB-type dehydrogenase domain-containing protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_277_4
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1907..2839)
DNA (933bp) protein (311aa)
Transcription regulator bin=GWC2_Syntrophobacterales_56_13 species=Desulfosporosinus meridiei genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_277_5
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3084..3428)
DNA (345bp) protein (115aa)
oxygen-insensitive NAD(P)H nitroreductase / dihydropteridine reductase (EC:1.5.1.34 1.-.-.-)
nitroreductase Tax=Anaerophaga thermohalophila RepID=UPI000237CF86
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_277_6
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3650..4147)
DNA (498bp) protein (166aa)
Rubrerythrin Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUY1_SYNAS
rubrerythrin
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_277_7
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4238..5098)
DNA (861bp) protein (287aa)
Alpha/beta hydrolase fold bin=GWF2_Syntrophobacterales_56_9 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
alpha/beta hydrolase fold protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_277_8
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5264..5995)
DNA (732bp) protein (244aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1Y9W4_9BACT
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_277_9
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6309..7400)
DNA (1092bp) protein (364aa)
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_277_10
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7742..8443)
DNA (702bp) protein (234aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 Tax=Aminomonas paucivorans DSM 12260 RepID=E3CVB6_9BACT
HAD-superfamily hydrolase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_277_11
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8465..9940)
DNA (1476bp) protein (492aa)
Protease Do-like 10, mitochondrial Tax=uncultured Desulfobacterium sp. RepID=E1Y957_9DELT
serine protease, related to trypsin
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_277_12
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10153..10599
DNA (447bp) protein (149aa)
UspA domain protein Tax=Dehalococcoides mccartyi RepID=A5FQ35_DEHSB
universal stress protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_277_13
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10771..11832
DNA (1062bp) protein (354aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
4Fe-4S protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_277_14
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12011..13324)
DNA (1314bp) protein (438aa)
DNA polymerase IV bin=GWC2_Nitrospirae_57_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
nucleotidyltransferase/DNA polymerase protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_277_15
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13342..13932)
DNA (591bp) protein (197aa)
LexA repressor bin=GWC2_Nitrospirae_57_13 species=uncultured bacterium W4-21b genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
DNA polymerase V subunit
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_277_16
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14089..14553
DNA (465bp) protein (155aa)
Putative uncharacterized protein bin=GWC2_CP_Nitrospirae-rel_42_7 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_277_17
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14891..15346)
DNA (456bp) protein (152aa)
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_277_18
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15792..16475)
DNA (684bp) protein (228aa)
flagellar motor protein MotB Tax=Halomonas lutea RepID=UPI00036FFD43
flagellar motor protein MotB
Tax=BJP_IG2069_Desfulfarculales_53_13
PLM4_90_coex_sep16_scaffold_277_19
unknown

Not on your lists

comp(16669..16893)
DNA (225bp) protein (75aa)

This feature has no annotations

PLM4_90_coex_sep16_scaffold_277_20
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17003..17137)
DNA (135bp) protein (45aa)
Uncharacterized protein Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DZ58_THIND
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA33661.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 /; ALEN2).;"
PLM4_90_coex_sep16_scaffold_277_21
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17325..17477)
DNA (153bp) protein (51aa)
hypothetical protein Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI00037988F2
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_277_22
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17658..17882)
DNA (225bp) protein (75aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_277_23
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17946..18272)
DNA (327bp) protein (109aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1YH31_9DELT
periplasmic or secreted lipoprotein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_277_24
RBG_16_Deltaproteobacteria_44_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18425..18571)
DNA (147bp) protein (49aa)
Uncharacterized protein Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EBL4_GEOBB
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_44_11_curated
PLM4_90_coex_sep16_scaffold_277_25
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18995..19357)
DNA (363bp) protein (121aa)
Uncharacterized protein Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PYB6_9BACT
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_49_23_curated
Displaying 25 items

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