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PLM4_90_coex_sep16_scaffold_622

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_coex_sep16_scaffold_622_1
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..148
DNA (147bp) protein (49aa)
Cysteine desulfurase family protein Tax=Clostridium thermocellum RepID=E6USG9_CLOTL
cysteine desulfurase
Cysteine desulfurase family protein {ECO:0000313|EMBL:ABN51890.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
PLM4_90_coex_sep16_scaffold_622_2
RIFOXYB2_FULL_Elusimicrobia_49_7_curated, Elusimicrobia, Bacteria

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145..429
DNA (285bp) protein (95aa)
Putative uncharacterized protein bin=GWF2_Bacteroidetes_33_38 species=Methanoregula formicica genus=Methanoregula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
Tax=RIFOXYB2_FULL_Elusimicrobia_49_7_curated
PLM4_90_coex_sep16_scaffold_622_3
unknown

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486..659
DNA (174bp) protein (58aa)

This feature has no annotations

PLM4_90_coex_sep16_scaffold_622_4
RIFOXYB2_FULL_Elusimicrobia_49_7_curated, Elusimicrobia, Bacteria

Not on your lists

652..1176
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A1P2_PELCD
hypothetical protein
Tax=RIFOXYB2_FULL_Elusimicrobia_49_7_curated
PLM4_90_coex_sep16_scaffold_622_5
RIFOXYB2_FULL_Elusimicrobia_49_7_curated, Elusimicrobia, Bacteria

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1188..1790
DNA (603bp) protein (201aa)
Putative uncharacterized protein bin=GWF2_Bacteroidetes_33_38 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein
Tax=RIFOXYB2_FULL_Elusimicrobia_49_7_curated
PLM4_90_coex_sep16_scaffold_622_6
unknown

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2029..2370
DNA (342bp) protein (114aa)

This feature has no annotations

PLM4_90_coex_sep16_scaffold_622_7
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3206..5173
DNA (1968bp) protein (656aa)
histidine kinase Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B5497D
PAS/PAC sensor protein
Tax=RBG_13_Deltaproteobacteria_43_22_curated
PLM4_90_coex_sep16_scaffold_622_8
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5475..6749
DNA (1275bp) protein (425aa)
Radical SAM domain protein Tax=Thermosinus carboxydivorans Nor1 RepID=A1HP80_9FIRM
Radical SAM domain protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_622_9
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6814..7419
DNA (606bp) protein (202aa)
GK22644 Tax=Drosophila willistoni RepID=B4NFH8_DROWI
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_18_curated
PLM4_90_coex_sep16_scaffold_622_10
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7488..8495)
DNA (1008bp) protein (336aa)
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase bin=GWC2_Geobacteraceae_55_20 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_622_11
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8522..9487)
DNA (966bp) protein (322aa)
peptidylprolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_622_12
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9509..10660)
DNA (1152bp) protein (384aa)
Putative Foldase protein prsA Tax=Nitrospina gracilis 3/211 RepID=M1YLV0_9BACT
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_622_13
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10657..11526)
DNA (870bp) protein (290aa)
PpiC-type peptidyl-prolyl cis-trans isomerase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDJ8_GEOUR
peptidylprolyl isomerase
Tax=RBG_16_Deltaproteobacteria_54_18_curated
Displaying 13 items

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