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PLM4_90_coex_sep16_scaffold_647

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_coex_sep16_scaffold_647_1
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1..297
DNA (297bp) protein (99aa)
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_647_2
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(530..1198)
DNA (669bp) protein (223aa)
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_647_3
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1537..2340
DNA (804bp) protein (268aa)
Putative dipeptide ABC transporter Tax=uncultured bacterium RepID=Q20JX8_9BACT
ABC-type dipeptide/oligopeptide/nickel transport system, permease component
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_647_4
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2337..2873
DNA (537bp) protein (179aa)
Negative regulator of beta-lactamase expression Tax=Pseudomonas stutzeri RCH2 RepID=L0GEZ5_PSEST
negative regulator of beta-lactamase expression
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_647_5
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2866..3888
DNA (1023bp) protein (341aa)
tRNA-dihydrouridine synthase bin=GWD2_Nitrospirae-related_57_8 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
nifR3; TIM barrel oxidoreductase NifR3
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_647_6
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3861..4634
DNA (774bp) protein (258aa)
hypothetical protein Tax=candidate division YNPFFA RepID=UPI00036DB78A
alpha/beta hydrolase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_647_7
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4640..5371
DNA (732bp) protein (244aa)
Ribosomal RNA small subunit methyltransferase E bin=GWC2_Methylomirabilis_70_16 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_647_8
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5406..6242)
DNA (837bp) protein (279aa)
mutY; A/G-specific adenine glycosylase (EC:3.2.2.-)
Glycosylase bin=GWC2_Nitrospirae-rel_56_14 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_647_9
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6365..6586
DNA (222bp) protein (74aa)
Regulatory protein, FmdB family Tax=Desulfococcus multivorans DSM 2059 RepID=S7TRU4_DESML
FmdB family regulatory protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_647_10
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6627..8414)
DNA (1788bp) protein (596aa)
Aminodeoxychorismate synthase, component I Tax=Xenococcus sp. PCC 7305 RepID=L8M9C4_9CYAN
para-aminobenzoate synthase, subunit I
Tax=RBG_16_Deltaproteobacteria_54_11_curated
Displaying 10 items

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