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PLM4_90_coex_sep16_scaffold_868

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_coex_sep16_scaffold_868_1
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3..1592
DNA (1590bp) protein (530aa)
Ribonucleoside-diphosphate reductase bin=GWF2_Planctomycete_41_51 species=Methanohalobium evestigatum genus=Methanohalobium taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
ribonucleoside-diphosphate reductase
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_coex_sep16_scaffold_868_2
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1614..2153
DNA (540bp) protein (180aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1WWG9_9BACT
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_868_3
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2196..2330
DNA (135bp) protein (45aa)
Rubredoxin reductase, selenocysteine-containing bin=GWC2_Geobacteraceae_55_20 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
rubredoxin reductase, selenocysteine-containing
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_868_4
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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2367..3551
DNA (1185bp) protein (395aa)
Rubredoxin reductase, selenocysteine-containing Tax=Geobacter metallireducens RepID=Q39WI8_GEOMG
rubredoxin reductase, selenocysteine-containing
Rubredoxin reductase, selenocysteine-containing {ECO:0000313|EMBL:ABB31386.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_90_coex_sep16_scaffold_868_5
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3679..3921
DNA (243bp) protein (81aa)
hypothetical protein Tax=unclassified Aminicenantes RepID=UPI00036F8AF7
SirA family protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_868_6
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3932..4294
DNA (363bp) protein (121aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA252-O11 RepID=UPI00037792D3
putative peroxiredoxin
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_868_7
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4384..5562
DNA (1179bp) protein (393aa)
cysteine desulfurase (EC:2.8.1.7)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA252-O11 RepID=UPI0003667AAE
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_868_8
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5559..6338
DNA (780bp) protein (260aa)
Putative FeS cluster assembly scaffold protein NifU bin=GWF2_Syntrophobacterales_56_9 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
FeS cluster assembly scaffold protein NifU
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_868_9
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6432..9314
DNA (2883bp) protein (961aa)
actP; copper-transporting P-type ATPase (EC:3.6.3.4)
Copper-(Or silver)-translocating P-type ATPase bin=GWA2_OP3_52_12 species=Methanocella conradii genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_coex_sep16_scaffold_868_10
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9304..9459
DNA (156bp) protein (52aa)
YHS domain-containing protein bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
YHS domain-containing protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_868_11
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9501..9923
DNA (423bp) protein (141aa)
rhodanese domain protein bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
rhodanese domain-containing protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_868_12
unknown

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9878..9997
DNA (120bp) protein (40aa)

This feature has no annotations

PLM4_90_coex_sep16_scaffold_868_13
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10031..10318
DNA (288bp) protein (96aa)
Putative uncharacterized protein Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CUL6_SIDLE
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
Displaying 13 items

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