ggKbase home page

PLM4_90_coex_sep16_scaffold_1140

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_coex_sep16_scaffold_1140_1
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..282
DNA (282bp) protein (94aa)
Dienelactone hydrolase family protein bin=GWC2_Nitrospirae-rel_56_14 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
dienelactone hydrolase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1140_2
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(299..985)
DNA (687bp) protein (229aa)
7-cyano-7-deazaguanine synthase bin=GWC2_Syntrophobacterales_56_13 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
queC; 7-cyano-7-deazaguanine synthase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1140_3
unknown

Not on your lists

comp(1074..2441)
DNA (1368bp) protein (456aa)

This feature has no annotations

PLM4_90_coex_sep16_scaffold_1140_4
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2522..2944)
DNA (423bp) protein (141aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1YPA7_9BACT
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1140_5
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3706..4770
DNA (1065bp) protein (355aa)
Integrase catalytic region Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8ILL4_METNO
Integrase catalytic domain-containing protein
Integrase catalytic region {ECO:0000313|EMBL:ACL61989.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
PLM4_90_coex_sep16_scaffold_1140_6
unknown

Not on your lists

5311..5418
DNA (108bp) protein (36aa)

This feature has no annotations

PLM4_90_coex_sep16_scaffold_1140_7
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5465..6997)
DNA (1533bp) protein (511aa)
Integrin-like repeat-containing protein Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0FUA4_9DELT
integrin-like repeat-containing protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_1140_8
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7360..7857)
DNA (498bp) protein (166aa)
Putative nucleic-acid-binding protein containing a Zn-ribbon Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C3P9_DESTA
putative nucleic-acid-binding protein containing a Zn-ribbon
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1140_9
RBG_19FT_COMBO_Chloroflexi_47_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(7868..9064)
DNA (1197bp) protein (399aa)
Acetyl-CoA acetyltransferase Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C3P8_DESTA
acetyl-CoA acetyltransferase
Tax=RBG_19FT_COMBO_Chloroflexi_47_15_curated
PLM4_90_coex_sep16_scaffold_1140_10
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9446..9580)
DNA (135bp) protein (45aa)
3-hydroxybutyryl-CoA dehydrogenase Tax=delta proteobacterium NaphS2 RepID=D8FF55_9DELT
Tax=RBG_13_Deltaproteobacteria_52_11_curated
Displaying 10 items

View Taxonomy