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PLM4_90_coex_sep16_scaffold_1507

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_coex_sep16_scaffold_1507_1
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..371)
DNA (369bp) protein (123aa)
Hypothetical cytosolic protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUX5_SYNAS
cytoplasmic protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1507_2
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(388..1623)
DNA (1236bp) protein (412aa)
Tyrosine--tRNA ligase Tax=delta proteobacterium NaphS2 RepID=D8F140_9DELT
tyrosyl-tRNA synthetase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1507_3
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1620..2411)
DNA (792bp) protein (264aa)
Metallophosphoesterase Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R8E1_AMMDK
metallophosphoesterase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1507_4
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2426..2803)
DNA (378bp) protein (126aa)
Ribonuclease Y bin=GWC2_Deltaproteobacteria_42_51 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
metal dependent phosphohydrolase
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_1507_5
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2748..4010)
DNA (1263bp) protein (421aa)
Ribonuclease Y Tax=Geobacter sulfurreducens RepID=RNY_GEOSL
rny; phosphodiesterase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1507_6
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4282..4566)
DNA (285bp) protein (95aa)
Z ring-associated protein bin=GWD2_Deltaproteobacteria_55_8 species=Acetonema longum genus=Acetonema taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
zapA; Z ring-associated protein ZapA
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1507_7
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4600..4839)
DNA (240bp) protein (80aa)
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1507_8
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4903..5871)
DNA (969bp) protein (323aa)
hypothetical protein; K02836 peptide chain release factor 2 bin=bin5_DeltaP species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
prfB; peptide chain release factor 2
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1507_trna_1
unknown

Not on your lists

6234..6304
DNA (71bp)
transferRNA Gln
PLM4_90_coex_sep16_scaffold_1507_9
unknown

Not on your lists

comp(6484..6588)
DNA (105bp) protein (35aa)

This feature has no annotations

PLM4_90_coex_sep16_scaffold_1507_10
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

6995..7462
DNA (468bp) protein (156aa)
Uncharacterized protein Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KVW5_SOLCM
hypothetical protein
Tax=RBG_13_Actinobacteria_55_18_curated
PLM4_90_coex_sep16_scaffold_1507_11
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

7497..8840
DNA (1344bp) protein (448aa)
Patatin Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LI93_SYNFM
patatin
Tax=RBG_13_Actinobacteria_55_18_curated
PLM4_90_coex_sep16_scaffold_1507_12
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8990..10738)
DNA (1749bp) protein (583aa)
Glutamine--tRNA ligase bin=GWC2_Syntrophobacterales_56_13 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
glutaminyl-tRNA synthetase
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_coex_sep16_scaffold_1507_13
unknown

Not on your lists

comp(10735..10851)
DNA (117bp) protein (39aa)

This feature has no annotations

PLM4_90_coex_sep16_scaffold_1507_trna_2
unknown

Not on your lists

11285..11357
DNA (73bp)
transferRNA Glu
PLM4_90_coex_sep16_scaffold_1507_14
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11429..11881
DNA (453bp) protein (151aa)
Carbon monoxide dehydrogenase subunit G Tax=Nitratireductor indicus C115 RepID=K2MZR7_9RHIZ
carbon monoxide dehydrogenase subunit G
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_coex_sep16_scaffold_1507_15
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12039..12557
DNA (519bp) protein (173aa)
hypothetical protein bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Desulfovibrio salexigens genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_coex_sep16_scaffold_1507_16
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12750..13946
DNA (1197bp) protein (399aa)
Uncharacterized protein bin=GWC2_Nitrospirae-rel_56_14 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
Displaying 18 items

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