ggKbase home page

PLM4_90_coex_sep16_scaffold_1648

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_coex_sep16_scaffold_1648_1
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..414
DNA (414bp) protein (138aa)
GXGXG motif-containing protein Tax=alpha proteobacterium SCGC AB-629-F11 RepID=UPI00036BB0A1
GXGXG motif-containing protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1648_2
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

424..1785
DNA (1362bp) protein (454aa)
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1648_3
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1974..4346
DNA (2373bp) protein (791aa)
lon; ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
ATP-dependent protease La
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_1648_4
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4739..5182
DNA (444bp) protein (148aa)
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase bin=GWA2_Ignavibacteria_55_11 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1648_5
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5408..6211)
DNA (804bp) protein (268aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037D90D1
orotidine 5'-phosphate decarboxylase
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_1648_6
RBG_16_OP11_45_19_curated, Microgenomates, Bacteria

Not on your lists

comp(6348..7610)
DNA (1263bp) protein (421aa)
Hamp domain/gaf domain/hd domain protein bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hamp domain/gaf domain/hd domain-containing protein
Tax=RBG_16_OP11_45_19_curated
PLM4_90_coex_sep16_scaffold_1648_7
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7610..8338)
DNA (729bp) protein (243aa)
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase 3 Tax=Geobacter uraniireducens (strain Rf4) RepID=PIMT3_GEOUR
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_1648_8
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8322..9062)
DNA (741bp) protein (247aa)
PP-loop domain protein Tax=Desulfococcus multivorans DSM 2059 RepID=S7VA23_DESML
PP-loop domain-containing protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1648_9
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9050..9604)
DNA (555bp) protein (185aa)
Endonuclease III Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NGM1_DESAR
HhH-GPD family protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_1648_10
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9879..10886)
DNA (1008bp) protein (336aa)
D-beta-D-heptose 7-phosphate kinase, domain I of bifunctional protein HldE bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
rfaE bifunctional protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1648_11
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10938..11603)
DNA (666bp) protein (222aa)
Glycosyltransferase, group 2 family protein Tax=delta proteobacterium NaphS2 RepID=D8F144_9DELT
glycosyltransferase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1648_12
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11578..12429)
DNA (852bp) protein (284aa)
Polysaccharide deactylase family protein, PEP-CTERM locus subfamily Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7J4C1_DESMD
polysaccharide deactylase family protein, PEP-CTERM locus subfamily
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1648_13
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12408..13286)
DNA (879bp) protein (293aa)
NAD-dependent epimerase/dehydratase Tax=Thermoanaerobacter ethanolicus CCSD1 RepID=C7IU51_THEET
NAD-dependent epimerase/dehydratase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1648_14
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13434..13829)
DNA (396bp) protein (132aa)
Putative uncharacterized protein Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CIW9_DESK7
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1648_15
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13826..14485)
DNA (660bp) protein (220aa)
Pyrimidine 5'-nucleotidase, putative Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A000_PELCD
pyrimidine 5'-nucleotidase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1648_16
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14606..15808
DNA (1203bp) protein (401aa)
aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YIN0_THEYD
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM4_90_coex_sep16_scaffold_1648_17
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15805..16365)
DNA (561bp) protein (187aa)
NUDIX hydrolase Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RDL3_DESPD
ADP-ribose pyrophosphatase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1648_18
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16692..16808
DNA (117bp) protein (39aa)
sppB; putative polyketide beta-ketoacyl synthase 2
Tax=RBG_16_Deltaproteobacteria_54_11_curated
Displaying 18 items

View Taxonomy