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PLM4_90_coex_sep16_Deltaproteobacteria_65_7

PLM4_90cm_coex_sep2016_RBG_16_Deltaproteobacteria_64_85_curated_65_7
In projects: PLM4_90cm_coex_sep2016  |  ERML-PLM4  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p

Consensus taxonomy: RBG_16_Deltaproteobacteria_64_85_curated  →  Deltaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 51-100 of 530 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM4_90_coex_sep16_scaffold_51408
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1186 bp 65.94 7.72 99.16
PLM4_90_coex_sep16_scaffold_51182
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1189 bp 65.18 7.32 94.37
PLM4_90_coex_sep16_scaffold_50964
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
1 1192 bp 66.69 7.42 99.92
PLM4_90_coex_sep16_scaffold_50837
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
1 1193 bp 54.32 6.79 99.83
PLM4_90_coex_sep16_scaffold_50907
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1193 bp 60.94 5.16 100.59
PLM4_90_coex_sep16_scaffold_50816
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1194 bp 62.40 5.90 94.22
PLM4_90_coex_sep16_scaffold_50268
Species: RBG_16_Deltaproteobacteria_64_85_curated (50%)
2 1200 bp 53.67 4.25 105.00
PLM4_90_coex_sep16_scaffold_50024
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1203 bp 64.34 6.73 84.79
PLM4_90_coex_sep16_scaffold_50010
Class: Deltaproteobacteria (66.67%)
3 1204 bp 55.81 5.11 70.76
PLM4_90_coex_sep16_scaffold_102384
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
3 1207 bp 67.77 6.46 88.24
PLM4_90_coex_sep16_scaffold_49679
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1208 bp 65.89 5.46 99.83
PLM4_90_coex_sep16_scaffold_49704
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1208 bp 65.89 6.46 96.11
PLM4_90_coex_sep16_scaffold_49327
Species: RBG_16_Deltaproteobacteria_64_85_curated (50%)
2 1212 bp 65.18 7.05 99.26
PLM4_90_coex_sep16_scaffold_49220
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1214 bp 61.29 6.43 98.35
PLM4_90_coex_sep16_scaffold_49167
Species: RBG_16_Deltaproteobacteria_64_85_curated (50%)
2 1215 bp 55.72 3.70 51.60
PLM4_90_coex_sep16_scaffold_49122
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1216 bp 67.35 5.67 98.68
PLM4_90_coex_sep16_scaffold_48750
Species: RBG_16_Deltaproteobacteria_64_85_curated (50%)
2 1221 bp 63.80 4.42 99.26
PLM4_90_coex_sep16_scaffold_48666
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
1 1222 bp 62.52 5.16 87.64
PLM4_90_coex_sep16_scaffold_48192
Species: RBG_16_Deltaproteobacteria_64_85_curated (50%)
2 1229 bp 62.49 6.47 100.33
PLM4_90_coex_sep16_scaffold_48195
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
3 1229 bp 63.14 7.69 99.84
PLM4_90_coex_sep16_scaffold_48047
Species: RBG_16_Deltaproteobacteria_64_85_curated (50%)
2 1231 bp 59.38 4.63 99.43
PLM4_90_coex_sep16_scaffold_47732
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1235 bp 66.56 10.45 99.84
PLM4_90_coex_sep16_scaffold_47766
Species: RBG_16_Deltaproteobacteria_64_85_curated (50%)
2 1235 bp 65.43 4.37 84.29
PLM4_90_coex_sep16_scaffold_47484
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1239 bp 64.16 4.72 97.58
PLM4_90_coex_sep16_scaffold_47425
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
1 1240 bp 67.98 6.53 84.44
PLM4_90_coex_sep16_scaffold_112541
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
1 1240 bp 59.92 6.53 92.90
PLM4_90_coex_sep16_scaffold_47182
Species: RBG_16_Deltaproteobacteria_64_85_curated (50%)
2 1243 bp 64.68 7.12 100.16
PLM4_90_coex_sep16_scaffold_47016
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1245 bp 66.83 7.83 96.87
PLM4_90_coex_sep16_scaffold_46971
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1246 bp 66.45 7.10 100.16
PLM4_90_coex_sep16_scaffold_46777
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1249 bp 67.57 6.61 96.08
PLM4_90_coex_sep16_scaffold_46021
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1260 bp 59.76 6.55 95.48
PLM4_90_coex_sep16_scaffold_45605
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1267 bp 68.03 6.87 100.16
PLM4_90_coex_sep16_scaffold_45515
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
3 1268 bp 63.56 7.45 90.62
PLM4_90_coex_sep16_scaffold_45473
Class: Deltaproteobacteria (66.67%)
3 1269 bp 62.10 5.32 97.40
PLM4_90_coex_sep16_scaffold_45101
Species: RBG_16_Deltaproteobacteria_64_85_curated (66.67%)
3 1274 bp 66.80 5.30 100.08
PLM4_90_coex_sep16_scaffold_44993
Species: RBG_16_Deltaproteobacteria_64_85_curated (66.67%)
3 1276 bp 62.77 7.41 98.75
PLM4_90_coex_sep16_scaffold_44917
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
1 1277 bp 64.21 6.46 99.84
PLM4_90_coex_sep16_scaffold_44417
Species: RBG_16_Deltaproteobacteria_64_85_curated (50%)
2 1284 bp 65.97 7.48 99.77
PLM4_90_coex_sep16_scaffold_44461
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
3 1284 bp 63.55 6.43 99.07
PLM4_90_coex_sep16_scaffold_44384
Class: Deltaproteobacteria (66.67%)
3 1285 bp 64.90 5.02 89.42
PLM4_90_coex_sep16_scaffold_87382
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1288 bp 67.31 6.99 101.55
PLM4_90_coex_sep16_scaffold_44035
Species: RBG_16_Deltaproteobacteria_64_85_curated (50%)
2 1291 bp 57.55 3.72 97.83
PLM4_90_coex_sep16_scaffold_44057
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1291 bp 61.35 4.18 97.37
PLM4_90_coex_sep16_scaffold_43896
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1293 bp 67.98 5.68 93.04
PLM4_90_coex_sep16_scaffold_43618
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
1 1297 bp 66.54 6.48 99.69
PLM4_90_coex_sep16_scaffold_43635
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
1 1297 bp 63.84 2.66 99.92
PLM4_90_coex_sep16_scaffold_43549
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1298 bp 64.71 9.24 96.15
PLM4_90_coex_sep16_scaffold_43052
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
3 1307 bp 61.90 5.85 85.85
PLM4_90_coex_sep16_scaffold_42957
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1309 bp 67.84 6.07 89.15
PLM4_90_coex_sep16_scaffold_95271
Species: RBG_16_Deltaproteobacteria_64_85_curated (100%)
2 1311 bp 67.20 7.78 84.90
Displaying items 51-100 of 530 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.