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PLM4_5_b1_sep16_scaffold_1038

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_1038_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..188)
DNA (186bp) protein (62aa)
lig; NAD-dependent DNA ligase (EC:6.5.1.2)
NAD-dependent DNA ligase LigA Tax=Marinobacterium stanieri RepID=UPI0002559B9F
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
PLM4_5_b1_sep16_scaffold_1038_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(189..620)
DNA (432bp) protein (144aa)
Cell division protein ZipA Tax=Sulfuricella denitrificans skB26 RepID=S6ACD4_9PROT
ZipA FtsZ-binding region protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_1038_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1187..4705)
DNA (3519bp) protein (1173aa)
Chromosome partition protein Smc Tax=Sulfuricella denitrificans skB26 RepID=S6ALD0_9PROT
chromosome segregation protein SMC
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_1038_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4783..5205
DNA (423bp) protein (141aa)
7-cyano-7-deazaguanine reductase; K09457 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
7-cyano-7-deazaguanine reductase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_1038_5
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5159..6058)
DNA (900bp) protein (300aa)
hypothetical protein Tax=Methyloversatilis universalis RepID=UPI0003787FFC
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
PLM4_5_b1_sep16_scaffold_1038_6
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6214..7407
DNA (1194bp) protein (398aa)
N-succinyl-L,L-diaminopimelate aminotransferase alternative Tax=Nitrosospira sp. APG3 RepID=M5DIR5_9PROT
Succinyldiaminopimelate aminotransferase {ECO:0000313|EMBL:KIO47887.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
succinyldiaminopimelate transaminase
PLM4_5_b1_sep16_scaffold_1038_7
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7428..8249
DNA (822bp) protein (274aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RKH3_ACCPU
PLM4_5_b1_sep16_scaffold_1038_8
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8340..9140
DNA (801bp) protein (267aa)
Putative uncharacterized protein Tax=Dechloromonas aromatica (strain RCB) RepID=Q477W6_DECAR
hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM4_5_b1_sep16_scaffold_1038_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9152..10321
DNA (1170bp) protein (390aa)
Probable twitching motility protein Tax=Azoarcus sp. (strain BH72) RepID=A1K718_AZOSB
twitching motility protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_1038_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10348..11316
DNA (969bp) protein (323aa)
50S ribosomal protein L3 glutamine methyltransferase Tax=Nitrosospira sp. APG3 RepID=M5DT44_9PROT
protein-(glutamine-N5) methyltransferase, 50S ribosomal protein L3-specific
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_1038_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11198..11944)
DNA (747bp) protein (249aa)
hypothetical protein Tax=Chitiniphilus shinanonensis RepID=UPI000376B8A3
RNA-binding S4 domain protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_1038_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12160..12768)
DNA (609bp) protein (203aa)
Recombination protein RecR Tax=Nitrosospira sp. APG3 RepID=M5DJ89_9PROT
recR; recombination protein RecR
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_1038_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12863..13189)
DNA (327bp) protein (109aa)
hypothetical protein Tax=Burkholderia kururiensis RepID=UPI0003469BB0
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_1038_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13200..14402)
DNA (1203bp) protein (401aa)
DNA-directed DNA polymerase Tax=Sulfuricella denitrificans skB26 RepID=S6B3W5_9PROT
dnaX; DNA-directed DNA polymerase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_1038_15
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14625..15173)
DNA (549bp) protein (183aa)
hypothetical protein Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI00035F3FE6
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
PLM4_5_b1_sep16_scaffold_1038_16
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15569..17542
DNA (1974bp) protein (658aa)
acs; acetate/CoA ligase (EC:6.2.1.1)
Acetyl-coenzyme A synthetase Tax=Sulfuricella denitrificans skB26 RepID=S6ACQ8_9PROT
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_5_b1_sep16_scaffold_1038_17
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17589..17789
DNA (201bp) protein (67aa)
Uncharacterized protein Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q124K2_POLSJ
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
PLM4_5_b1_sep16_scaffold_1038_18
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17828..19786
DNA (1959bp) protein (653aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Periplasmic sensor signal transduction histidine kinase Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q124K1_POLSJ
sensor signal transduction histidine kinase
Displaying 18 items

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