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PLM4_5_b1_sep16_scaffold_3824

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_3824_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..880)
DNA (879bp) protein (293aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10)
IMP cyclohydrolase Tax=Cupriavidus sp. WS RepID=UPI000370795F
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_3824_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(950..1192)
DNA (243bp) protein (81aa)
Fis family transcriptional regulator Tax=Sulfuricella denitrificans skB26 RepID=S6AAM8_9PROT
Fis family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_3824_3
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1189..2196)
DNA (1008bp) protein (336aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
tRNA-dihydrouridine synthase Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCT1_NITMU
dihydrouridine synthase TIM-barrel protein nifR3
PLM4_5_b1_sep16_scaffold_3824_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2294..2785)
DNA (492bp) protein (164aa)
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CTI5_SIDLE
ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM4_5_b1_sep16_scaffold_3824_5

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comp(2758..3342)
DNA (585bp) protein (195aa)
2-octaprenyl-6-methoxyphenol hydroxylase,FAD/NAD(P)-binding {ECO:0000313|EMBL:CBI08798.1}; EC=1.14.13.- {ECO:0000313|EMBL:CBI08798.1};; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
2-octaprenyl-6-methoxyphenol hydroxylase,FAD/NAD(P)-binding Tax=mine drainage metagenome RepID=E6QNH7_9ZZZZ
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase
PLM4_5_b1_sep16_scaffold_3824_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3335..4657)
DNA (1323bp) protein (441aa)
Peptidase M24 Tax=Methylovorus sp. (strain MP688) RepID=E4QJD3_METS6
pepP; peptidase m24
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_3824_7
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4693..5373)
DNA (681bp) protein (227aa)
Nucleotidyl transferase Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P7I6_AROAE
nucleotidyl transferase
Nucleotidyl transferase {ECO:0000313|EMBL:CAI06725.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
PLM4_5_b1_sep16_scaffold_3824_8
Methylobacillus flagellatus, Methylobacillus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5441..6445)
DNA (1005bp) protein (335aa)
Aminoglycoside phosphotransferase Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1GZC2_METFK
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ABE50415.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylobacillus.;" source="Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875).;"
PLM4_5_b1_sep16_scaffold_3824_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6533..8830
DNA (2298bp) protein (766aa)
LPS-assembly protein LptD Tax=Sulfuricella denitrificans skB26 RepID=S6AJ85_9PROT
organic solvent tolerance protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_3824_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8850..9242
DNA (393bp) protein (131aa)
Chaperone SurA Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPR6_AZOSU
parvulin-like peptidyl-prolyl isomerase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Displaying 10 items

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