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PLM4_5_b1_sep16_scaffold_2055

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_2055_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(123..1100)
DNA (978bp) protein (326aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_2055_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1097..2089)
DNA (993bp) protein (331aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_2055_3
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(2086..2289)
DNA (204bp) protein (68aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM4_5_b1_sep16_scaffold_2055_4
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(2286..3041)
DNA (756bp) protein (252aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_5_b1_sep16_scaffold_2055_5
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(3086..4027)
DNA (942bp) protein (314aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_5_b1_sep16_scaffold_2055_6
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4709..4891
DNA (183bp) protein (61aa)
CsbD family protein Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GGE0_NITSI
General stress protein CsbD {ECO:0000313|EMBL:KIO48504.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
CsbD family protein
PLM4_5_b1_sep16_scaffold_2055_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5020..6009)
DNA (990bp) protein (330aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_5_b1_sep16_scaffold_2055_8
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(6006..6209)
DNA (204bp) protein (68aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM4_5_b1_sep16_scaffold_2055_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(6317..6757)
DNA (441bp) protein (147aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM4_5_b1_sep16_scaffold_2055_10
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7012..8016)
DNA (1005bp) protein (335aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM4_5_b1_sep16_scaffold_2055_11
Burkholderia sp. CCGE1002, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8376..9911)
DNA (1536bp) protein (512aa)
Uncharacterized protein Tax=Burkholderia sp. (strain CCGE1002) RepID=D5WA08_BURSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG14230.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1002).;"
PLM4_5_b1_sep16_scaffold_2055_trna_1
unknown

Not on your lists

comp(10014..10086)
DNA (73bp)
transferRNA Ala
PLM4_5_b1_sep16_scaffold_2055_12
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10199..10999
DNA (801bp) protein (267aa)
SapC family protein Tax=Burkholderia pseudomallei RepID=S5P1N1_BURPE
sapC family protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_5_b1_sep16_scaffold_2055_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10996..11778)
DNA (783bp) protein (261aa)
prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase Tax=mine drainage metagenome RepID=E6QX85_9ZZZZ
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_2055_14
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11846..13519
DNA (1674bp) protein (558aa)
Dihydroxy-acid dehydratase Tax=Hydrocarboniphaga effusa AP103 RepID=I8I311_9GAMM
LysR family transcriptional regulator
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM4_5_b1_sep16_scaffold_2055_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

13554..14570
DNA (1017bp) protein (339aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
PLM4_5_b1_sep16_scaffold_2055_16
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14690..15670
DNA (981bp) protein (327aa)
Putative serine protease Tax=Oceanibaculum indicum P24 RepID=K2KHQ3_9PROT
PDZ/DHR/GLGF domain-containing protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM4_5_b1_sep16_scaffold_2055_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15723..16478
DNA (756bp) protein (252aa)
thioredoxin Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037A23DA
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_2055_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16427..17224
DNA (798bp) protein (266aa)
Putative uncharacterized protein Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSP7_SIDLE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Displaying 19 items

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