ggKbase home page

PLM4_5_b1_sep16_scaffold_2175

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_2175_1
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..360
DNA (360bp) protein (120aa)
Cytochrome C biogenesis protein Tax=Dechloromonas aromatica (strain RCB) RepID=Q478K6_DECAR
cytochrome C biogenesis protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM4_5_b1_sep16_scaffold_2175_2
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

357..1604
DNA (1248bp) protein (416aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6B7X6_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_5_b1_sep16_scaffold_2175_3
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1720..3408
DNA (1689bp) protein (563aa)
Nitrite reductase (Cytochrome; ammonia-forming) bin=GWC2_Proteo_65_14_Ab886 species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
nitrite reductase
Tax=RBG_16_Deltaproteobacteria_64_85_curated
PLM4_5_b1_sep16_scaffold_2175_4
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3409..4035
DNA (627bp) protein (209aa)
hypothetical protein Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI00035E55FC
cytochrome C biogenesis protein CcmI
Tax=RBG_16_Gammaproteobacteria_57_12_curated
PLM4_5_b1_sep16_scaffold_2175_5
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4037..4213)
DNA (177bp) protein (59aa)
Putative uncharacterized protein Tax=Laribacter hongkongensis (strain HLHK9) RepID=C1D9H1_LARHH
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_2175_6
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4210..4950)
DNA (741bp) protein (247aa)
Heme exporter protein CcmC Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9Q6_NITMU
heme exporter protein CcmC
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_5_b1_sep16_scaffold_2175_7
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4967..5650)
DNA (684bp) protein (228aa)
Heme exporter protein B Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9Q2_NITMU
heme exporter protein CcmB
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
PLM4_5_b1_sep16_scaffold_2175_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5647..6267)
DNA (621bp) protein (207aa)
ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA Tax=Nitrosospira sp. APG3 RepID=M5DI50_9PROT
cytochrome c biogenesis protein CcmA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM4_5_b1_sep16_scaffold_2175_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6491..8131
DNA (1641bp) protein (547aa)
malate dehydrogenase (EC:1.1.1.38)
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+)) Tax=Bradyrhizobium sp. STM 3843 RepID=H0TXX8_9BRAD
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM4_5_b1_sep16_scaffold_2175_10
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8156..8740
DNA (585bp) protein (195aa)
pyruvate/ketoisovalerate oxidoreductase subunit gamma (EC:1.2.7.1)
Pyruvate/ketoisovalerate oxidoreductase, gamma subunit Tax=Thiothrix nivea DSM 5205 RepID=I3BUB6_9GAMM
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_2175_11
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8733..9089
DNA (357bp) protein (119aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y2S4_LEPCP
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
Tax=GWA2_Rhodocyclales_65_20_curated
Displaying 11 items

View Taxonomy