ggKbase home page

PLM4_5_b1_sep16_scaffold_30020

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_30020_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75..1058
DNA (984bp) protein (328aa)
Tricarboxylate binding receptor Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SXI4_JANMA
tctC6; tricarboxylate binding receptor
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_30020_2
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1086..2306)
DNA (1221bp) protein (407aa)
Putative transport protein Tax=Bordetella bronchiseptica RepID=K4QRK3_BORBO
transporter
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM4_5_b1_sep16_scaffold_30020_3
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2408..2671
DNA (264bp) protein (88aa)
AraC-family regulatory protein Tax=Bordetella RepID=Q7W5D1_BORPA
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:KCB45564.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
AraC-family regulatory protein
PLM4_5_b1_sep16_scaffold_30020_4
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2659..3063
DNA (405bp) protein (135aa)
DNA-binding helix-turn-helix protein Tax=Bordetella RepID=V8TZP2_BORPT
AraC family transcriptional regulator
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ETH92011.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis STO1-CHOC-0019.;"
PLM4_5_b1_sep16_scaffold_30020_5
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3076..3456)
DNA (381bp) protein (127aa)
WD40 repeat, subgroup bin=GWC2_Syntrophobacterales_56_13 species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
peptidase C14 caspase catalytic subunit p20
Tax=RBG_16_Gammaproteobacteria_62_13__curated
Displaying 5 items

View Taxonomy