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PLM4_5_b1_sep16_scaffold_641

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_641_1
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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191..898
DNA (708bp) protein (236aa)
Putative uncharacterized protein Tax=Oscillatoria RepID=D8FXN2_9CYAN
Methyltransferase {ECO:0000313|EMBL:KJB90254.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
type 11 methyltransferase
PLM4_5_b1_sep16_scaffold_641_2
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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975..1874
DNA (900bp) protein (300aa)
Uncharacterized protein Tax=Bradyrhizobium sp. ORS 375 RepID=H0SEG7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD92594.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_641_3
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1871..3136)
DNA (1266bp) protein (422aa)
NDP-hexose 3-C-methyltransferase Tax=Bradyrhizobium sp. STM 3843 RepID=H0TPS5_9BRAD
NDP-hexose 3-C-methyltransferase {ECO:0000313|EMBL:CCE08463.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
putative SAM-dependent methyltransferase
PLM4_5_b1_sep16_scaffold_641_4
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3153..4043)
DNA (891bp) protein (297aa)
Uncharacterized protein Tax=Bradyrhizobium sp. STM 3843 RepID=H0TPS6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE08464.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
dTDP-4-dehydrorhamnose reductase
PLM4_5_b1_sep16_scaffold_641_5
Chlorobium ferrooxidans, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(4040..4579)
DNA (540bp) protein (180aa)
Uncharacterized protein Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YTW2_9CHLB
Uncharacterized protein {ECO:0000313|EMBL:EAT59790.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium ferrooxidans DSM 13031.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_641_6
Chlorobium ferrooxidans, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(4576..5790)
DNA (1215bp) protein (405aa)
Uncharacterized protein Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YTW1_9CHLB
Uncharacterized protein {ECO:0000313|EMBL:EAT59791.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium ferrooxidans DSM 13031.;"
putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase
PLM4_5_b1_sep16_scaffold_641_7
Chlorobium ferrooxidans, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(5797..6855)
DNA (1059bp) protein (353aa)
Alcohol dehydrogenase superfamily, zinc-containing:Alcohol dehydrogenase, zinc-containing Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YTW0_9CHLB
Alcohol dehydrogenase superfamily, zinc-containing:Alcohol dehydrogenase, zinc-containing {ECO:0000313|EMBL:EAT59792.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium ferrooxidans DSM 13031.;"
zinc-containing alcohol dehydrogenase superfamily protein
PLM4_5_b1_sep16_scaffold_641_8
Chlorobium ferrooxidans, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(6866..7537)
DNA (672bp) protein (224aa)
Methyltransferase Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YTV9_9CHLB
Methyltransferase {ECO:0000313|EMBL:EAT59793.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium ferrooxidans DSM 13031.;"
SAM-dependent methyltransferase
PLM4_5_b1_sep16_scaffold_641_9
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7588..8616)
DNA (1029bp) protein (343aa)
hypothetical protein Tax=Herbaspirillum seropedicae RepID=UPI00037FD28E
hypothetical protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
PLM4_5_b1_sep16_scaffold_641_10
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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comp(8616..9218)
DNA (603bp) protein (201aa)
hypothetical protein Tax=Herbaspirillum seropedicae RepID=UPI0002D6E7E5
hypothetical protein
Tax=GWF2_Lentisphaerae_57_35_curated
PLM4_5_b1_sep16_scaffold_641_11
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9242..10177)
DNA (936bp) protein (312aa)
transketolase, C-terminal section (TK) (EC:2.2.1.1)
transketolase Tax=Herbaspirillum seropedicae RepID=UPI0002EF39F8
Putative transketolase {ECO:0000313|EMBL:EIJ48589.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. GW103.;"
PLM4_5_b1_sep16_scaffold_641_12
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10174..10995)
DNA (822bp) protein (274aa)
transketolase Tax=Herbaspirillum seropedicae RepID=UPI00031A2962
Transketolase subunit A {ECO:0000313|EMBL:EIJ48588.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. GW103.;"
putative transketolase N-terminal section
PLM4_5_b1_sep16_scaffold_641_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11039..12037)
DNA (999bp) protein (333aa)
hypothetical protein Tax=Herbaspirillum seropedicae RepID=UPI0002E8AAA3
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADU43046.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
PLM4_5_b1_sep16_scaffold_641_14
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12043..12633)
DNA (591bp) protein (197aa)
Phosphoheptose isomerase Tax=Herbaspirillum sp. CF444 RepID=J2TRR4_9BURK
Phosphoheptose isomerase {ECO:0000313|EMBL:EJL81422.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
putative phosphoheptose isomerase
PLM4_5_b1_sep16_scaffold_641_15
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12630..13568)
DNA (939bp) protein (313aa)
sugar-nucleotide epimerase/dehydratase (EC:5.1.3.2)
Putative sugar-nucleotide epimerase/dehydratase {ECO:0000313|EMBL:ABQ37591.1}; EC=5.1.3.2 {ECO:0000313|EMBL:ABQ37591.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
Putative sugar-nucleotide epimerase/dehydratase Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EN47_BRASB
PLM4_5_b1_sep16_scaffold_641_16
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13990..15474
DNA (1485bp) protein (495aa)
Cytidyltransferase-related enzyme Tax=Herbaspirillum sp. CF444 RepID=J2TRS5_9BURK
Bifunctional protein HldE {ECO:0000256|SAAS:SAAS00232998}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
ADP-heptose synthase
PLM4_5_b1_sep16_scaffold_641_17
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15478..16176
DNA (699bp) protein (233aa)
Putative sugar-phosphate nucleotidyl transferase {ECO:0000313|EMBL:CCE08479.1}; EC=2.7.7.13 {ECO:0000313|EMBL:CCE08479.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
sugar-phosphate nucleotidyl transferase (EC:2.7.7.13)
hypothetical protein Tax=Herbaspirillum seropedicae RepID=UPI0003114BB7
PLM4_5_b1_sep16_scaffold_641_18
Mariprofundus ferrooxydans, Mariprofundus, Mariprofundales, Zetaproteobacteria, Proteobacteria, Bacteria

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comp(16212..17312)
DNA (1101bp) protein (367aa)
Capsular polysaccharide synthesis enzyme CapF Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZA0_9PROT
Capsular polysaccharide synthesis enzyme CapF {ECO:0000313|EMBL:EAU54524.1}; species="Bacteria; Proteobacteria; Zetaproteobacteria; Mariprofundales; Mariprofundaceae; Mariprofundus.;" source="Mariprofundus ferrooxydans PV-1.;"
NAD-dependent epimerase/dehydratase
PLM4_5_b1_sep16_scaffold_641_19
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

comp(17514..18677)
DNA (1164bp) protein (388aa)
Similar to mannosyltransferase B Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVZ5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKR04504.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_14.;"
putative GT4 : distantly related to phosphatidylinositol a-mannosyltransferase
PLM4_5_b1_sep16_scaffold_641_20
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(18652..19323)
DNA (672bp) protein (224aa)
Asparagine synthetase bin=GWC2_Proteo_65_14_Ab886 species=Phaeospirillum molischianum genus=Phaeospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
asparagine synthase
Tax=GWC2_Deltaproteobacteria_65_14_curated
Displaying 20 items

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