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PLM4_5_b1_sep16_scaffold_875

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_875_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

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1..879
DNA (879bp) protein (293aa)
Glutamine--tRNA ligase Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1GZI8_METFK
glutaminyl-tRNA synthetase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM4_5_b1_sep16_scaffold_875_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

896..1750
DNA (855bp) protein (285aa)
hypothetical protein Tax=Massilia niastensis RepID=UPI00036C80AF
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_875_3
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1786..2847
DNA (1062bp) protein (354aa)
Uncharacterized protein Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J9E5_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB66241.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
PLM4_5_b1_sep16_scaffold_875_4
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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2851..3699
DNA (849bp) protein (283aa)
isomerase Tax=Cupriavidus sp. WS RepID=UPI0003709B44
isomerase
Tax=RBG_16_Gamma2_60_9_curated
PLM4_5_b1_sep16_scaffold_875_5
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3854..5245
DNA (1392bp) protein (464aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI000371C204
2-methylcitrate dehydratase
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
PLM4_5_b1_sep16_scaffold_875_6
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5250..6227)
DNA (978bp) protein (326aa)
Uncharacterized protein Tax=Cupriavidus basilensis OR16 RepID=H1SCP5_9BURK
Tricarboxylate transport protein TctC
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG22930.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
PLM4_5_b1_sep16_scaffold_875_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6249..6629)
DNA (381bp) protein (127aa)
Uncharacterized protein Tax=Methyloglobulus morosus KoM1 RepID=V5C546_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_875_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6684..7739)
DNA (1056bp) protein (352aa)
Nucleoside-diphosphate-sugar epimerase Tax=Lutibaculum baratangense AMV1 RepID=V4TBK9_9RHIZ
NAD-dependent dehydratase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_875_9
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7765..9309)
DNA (1545bp) protein (515aa)
D-galactarate dehydratase/altronate hydrolase family protein 3 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F652_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJZ63712.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
PLM4_5_b1_sep16_scaffold_875_10
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9584..10627
DNA (1044bp) protein (348aa)
Peptidase M19 renal dipeptidase Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1MA23_METRJ
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ45429.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
peptidase M19
PLM4_5_b1_sep16_scaffold_875_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10627..11574
DNA (948bp) protein (316aa)
Uncharacterized protein bin=GWC2_Syntrophus__56_31 species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
putative Bug-like extracytoplasmic solute binding receptor, TTT family
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM4_5_b1_sep16_scaffold_875_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11598..12422
DNA (825bp) protein (275aa)
Putative hydrolase Tax=Bradyrhizobium sp. S23321 RepID=I0G1S3_9BRAD
putative hydrolase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_875_13
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12549..12809)
DNA (261bp) protein (87aa)
Probable signal peptide protein Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46XT5_CUPPJ
signal peptide protein
Probable signal peptide protein {ECO:0000313|EMBL:AAZ62048.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
PLM4_5_b1_sep16_scaffold_875_14
unknown

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comp(12942..13733)
DNA (792bp) protein (264aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_875_15
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13793..14188)
DNA (396bp) protein (132aa)
Activator of Hsp90 ATPase 1 family protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5K6_GEOUR
activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:ABQ27074.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_5_b1_sep16_scaffold_875_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14307..15347
DNA (1041bp) protein (347aa)
guaC; guanosine 5'-monophosphate oxidoreductase (EC:1.7.1.7)
guanosine 5''''-monophosphate oxidoreductase Tax=Herbaspirillum sp. JC206 RepID=UPI0002D613BD
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
Displaying 16 items

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