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PLM4_5_b1_sep16_scaffold_5300

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_5300_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..438
DNA (438bp) protein (146aa)
nth; endonuclease III (EC:4.2.99.18)
endonuclease III Tax=Rudaea cellulosilytica RepID=UPI0003813E55
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_5300_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

448..879
DNA (432bp) protein (144aa)
Putative uncharacterized protein Tax=uncultured bacterium CSL11 RepID=G4WVC4_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_5300_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(943..1197)
DNA (255bp) protein (85aa)
Cytochrome c, class IC Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P1B8_AROAE
cytC2; cytochrome c, class IC
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_5300_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1227..1568)
DNA (342bp) protein (114aa)
Uncharacterized protein Tax=Thauera terpenica 58Eu RepID=T0AYK4_9RHOO
cytC1; cytochrome c, class IC
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_5300_5
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1665..2114)
DNA (450bp) protein (150aa)
Putative uncharacterized protein bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_5_b1_sep16_scaffold_5300_6
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2119..3078)
DNA (960bp) protein (320aa)
Putative permease Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQN5_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_5_b1_sep16_scaffold_5300_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3375..3698
DNA (324bp) protein (108aa)
ATP:Cob(I)alamin adenosyltransferase (EC:2.5.1.17)
ATP--cobalamin adenosyltransferase Tax=Herbaspirillum sp. JC206 RepID=UPI0002D9B28C
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_5300_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3726..4625)
DNA (900bp) protein (300aa)
Substrate-binding periplasmic (PBP) ABC transporter protein Tax=Sulfuricella denitrificans skB26 RepID=S6AI39_9PROT
substrate-binding periplasmic (PBP) ABC transporter protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_5300_9
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4651..5187)
DNA (537bp) protein (179aa)
cyclic nucleotide-binding domain-containing protein
Putative transcriptional regulator, Crp/Fnr family bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_5_b1_sep16_scaffold_5300_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5223..6293)
DNA (1071bp) protein (357aa)
aroG1; 3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase Tax=Thauera terpenica 58Eu RepID=S9ZTR6_9RHOO
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_5300_11
unknown

Not on your lists

6505..6942
DNA (438bp) protein (146aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_5300_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6978..7562
DNA (585bp) protein (195aa)
Uncharacterized protein Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SXJ0_META2
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_5300_13
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7575..8888)
DNA (1314bp) protein (438aa)
TPR repeat-containing protein Tax=Azospirillum sp. (strain B510) RepID=D3P8E4_AZOS1
TPR repeat-containing protein
TPR repeat-containing protein {ECO:0000313|EMBL:BAI76923.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
Displaying 13 items

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