ggKbase home page

PLM4_5_b1_sep16_scaffold_20048

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_20048_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..237)
DNA (237bp) protein (79aa)
hypothetical protein Tax=Limnohabitans sp. Rim47 RepID=UPI0002E82B5A
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_20048_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(295..1128)
DNA (834bp) protein (278aa)
Squalene/phytoene synthase Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6I7_NITMU
squalene/phytoene synthase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_20048_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1139..1951)
DNA (813bp) protein (271aa)
squalene synthase HpnC (EC:2.5.1.32)
Squalene synthase HpnC Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CRT8_SIDLE
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_20048_trna_1
unknown

Not on your lists

2064..2145
DNA (82bp)
transferRNA Leu
PLM4_5_b1_sep16_scaffold_20048_4
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2199..2912
DNA (714bp) protein (238aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Trigger factor Tax=Nitrosospira sp. APG3 RepID=M5DL10_9PROT
tig; trigger factor
Displaying 5 items

View Taxonomy