ggKbase home page

PLM4_5_b1_sep16_scaffold_991_15

Organism: PLM4_5_b1_sep16_Nitrosospira_multiformis_62_13

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: comp(7607..8194)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L5 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=RL5_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 179.0
  • Bit_score: 303
  • Evalue 1.00e-79
rplE; 50S ribosomal protein L5 similarity KEGG
DB: KEGG
  • Identity: 83.2
  • Coverage: 179.0
  • Bit_score: 303
  • Evalue 3.00e-80
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 188.0
  • Bit_score: 305
  • Evalue 3.00e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Betaproteobacteria_64_14 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGAGTACTCAGCCCAAGACCGCCGGCAAAGAGAAGGGCGCAGCGGCAGTGAGCCGTCTGCAGACGCATTACCAGCAGGACGTGGTCAAGAAACTGGTCGGCCAGTTCGGCTATAAGTCGGTAATGCAGGTCCCGCGCATCGAGAAAATCACGCTCAACATGGGCGTGGGCGAAGCGGTGAACGACAAGAAGATCATGGACAACGCGGTTGGCGACATGACCAAGATCGCGGGCCAGAAGCCGCTCGTGACGAAGTCGCGCAAGTCGATTGCGACCTTCAAGATCCGCGACAACTACCCGATCGGCTGCAAGGTCACGCTGCGCGGCACACGCATGTATGAATTCCTCGACCGCCTGGTGAACATCGCGATTCCGCGCATCCGCGACTTTCGCGGGATCCCCGGCAAATCGTTCGACGGCCGCGGCAACTTCAATTTCGGCATCAAGGAACAGATCATTTTTCCCGAAATCGAGTACGACAAAATCGATGCGTTGCGCGGCATGAACATCACGATCACCACTACCGCCAAGACCGACGCCGAAGGGCGCGCGCTGCTGGCGGCATTCAAATTTCCGTTCAGGAACTAG
PROTEIN sequence
Length: 196
MSTQPKTAGKEKGAAAVSRLQTHYQQDVVKKLVGQFGYKSVMQVPRIEKITLNMGVGEAVNDKKIMDNAVGDMTKIAGQKPLVTKSRKSIATFKIRDNYPIGCKVTLRGTRMYEFLDRLVNIAIPRIRDFRGIPGKSFDGRGNFNFGIKEQIIFPEIEYDKIDALRGMNITITTTAKTDAEGRALLAAFKFPFRN*