ggKbase home page

PLM4_5_b1_sep16_scaffold_3205_20

Organism: PLM4_5_b1_sep16_Nitrosospira_multiformis_62_13

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: 13936..14268

Top 3 Functional Annotations

Value Algorithm Source
L-carnitine dehydratase/bile acid-inducible protein F bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderia gladioli genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 71.7
  • Coverage: 106.0
  • Bit_score: 162
  • Evalue 1.30e-37
acyl-CoA transferase/carnitine dehydratase similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 103.0
  • Bit_score: 160
  • Evalue 2.30e-37
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 109.0
  • Bit_score: 193
  • Evalue 9.30e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 333
ATGGTCAACCACAAGCTTCCACTCGAAGGCATACGCGTCGTCGAATTCGTGCACGTGATCATGGGGCCGAGCTGCGGGCTCGTGCTCGCGGATCTCGGCGCCGAAGTTATCAAGGTCGAGCCGCTCGACGGGGATCACACGCGCAAGCTGACGGCGTCGGGCGCGGGTTTCTTTCCGACTTTCAATCGCAACAAGAAAAGCATCGCGGTCGACTTGAAGTCCAAGGAAGGCCAGGAGATCGTGCTGAAGCTGATCAAGAGCGCCGATGTGCTGACCGAAAATTTCCGTCCCGGCGCGATGGACAAGCTGGGCTTCGGTTACGGTGCGCTCAGC
PROTEIN sequence
Length: 111
MVNHKLPLEGIRVVEFVHVIMGPSCGLVLADLGAEVIKVEPLDGDHTRKLTASGAGFFPTFNRNKKSIAVDLKSKEGQEIVLKLIKSADVLTENFRPGAMDKLGFGYGALS