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PLM4_5_b1_sep16_scaffold_4257_5

Organism: PLM4_5_b1_sep16_Nitrosospira_multiformis_62_13

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: comp(3108..3656)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Collimonas fungivorans (strain Ter331) RepID=G0AGR0_COLFT similarity UNIREF
DB: UNIREF100
  • Identity: 55.9
  • Coverage: 186.0
  • Bit_score: 196
  • Evalue 2.20e-47
ECF family RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 186.0
  • Bit_score: 196
  • Evalue 6.20e-48
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 186.0
  • Bit_score: 196
  • Evalue 3.10e-47

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Taxonomy

Collimonas fungivorans → Collimonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
GTGACAGACCCCGATAAAGCAAAGCGCTTCGACGCGATGGTGCTGCCGCATCTCGACGCGGCCTACAACCTGGCGCGATGGCTTGCCAGAAACGACGCGGACGCGCAGGACATCGCGCAGGAAGCCTGCCTTCGCGCATATAAATTCTTCGACGGTTTCCACGGTGACGACGGCAAGTCGTGGCTGCTGGCGATCGTTCGCAACACCTGTTACACATGGCTGCAAAAACATCGCGGCCGGTCGCGCGAAGAATCGTTTGACGAGAATATCCACGGCGACGATCCGGCGTTCGTCGACACCCTGCCGCACAACAATCCCGAGGTGCTGCTCATGCAACAGGCAAGCAAGCGCATTATCGACACGGCCCTGGAACGGCTGCCCGTCGAGTGCCGTGAAATCATCGTGCTGCGGGAACTCGAAGATCTGTCTTACAAAGAAATTGCCGAAATCGCCGAAATCCCGATAGGTACCGTGATGTCCCGCCTTTCGCGCGCACGCAAGCTGCTGCGCGAACAGCTGGAACGCCAGAGCGCGGATTTGCAATCATGA
PROTEIN sequence
Length: 183
VTDPDKAKRFDAMVLPHLDAAYNLARWLARNDADAQDIAQEACLRAYKFFDGFHGDDGKSWLLAIVRNTCYTWLQKHRGRSREESFDENIHGDDPAFVDTLPHNNPEVLLMQQASKRIIDTALERLPVECREIIVLRELEDLSYKEIAEIAEIPIGTVMSRLSRARKLLREQLERQSADLQS*