ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

PLM4_5_b1_sep16_scaffold_4257_10

Organism: PLM4_5_b1_sep16_Nitrosospira_multiformis_62_13

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: comp(6626..7108)

Top 3 Functional Annotations

Value Algorithm Source
Cupin 2 conserved barrel domain protein Tax=Methylobacter tundripaludum SV96 RepID=G3J1F4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 84.9
  • Coverage: 159.0
  • Bit_score: 288
  • Evalue 3.70e-75
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:EGW21026.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 159.0
  • Bit_score: 288
  • Evalue 5.20e-75
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 159.0
  • Bit_score: 270
  • Evalue 3.00e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methylobacter tundripaludum → Methylobacter → Methylococcales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 483
ATGACAGAAAAGTCCCATGCAGTCGCGGTCGCGGCCGCCGAAGTACCGGCCCGCAGCAGGCCCTCGGTGTATCCCGAGCCGTTTGCATCGCGTATGGCTGGCAGAGAAAAGCGCCAGCTTGGCGATCTCTTCGGTCTCACGAATTTTGGCGTCAACCTCACCCGTCTCGCGCCAAATGCAATTTCGGCCCTTCGCCACGCTCATACCAGGCAGGACGAATTCGTCTATATCCTGCAAGGCCGGCCGACGCTGCATACCGACGAGGGCCGCACGCAGCTCTCGCCGGGAATGTGCGCGGGCTTCCGGGCGGGCACAGGCAATGGTCACCGCCTGATCAACGATACTGGCGAGGAGGTCGTATACCTCGAAGTCGGCGACCGCACGCCGGGTGACGAAGGTAGCTACCCGGATGACGACCTCCAAGCCGCGCTCGTGGAAGGAAAGTGGAAGTTCGTCCACAAAAACGGCGCCCCGTACCGGTGA
PROTEIN sequence
Length: 161
MTEKSHAVAVAAAEVPARSRPSVYPEPFASRMAGREKRQLGDLFGLTNFGVNLTRLAPNAISALRHAHTRQDEFVYILQGRPTLHTDEGRTQLSPGMCAGFRAGTGNGHRLINDTGEEVVYLEVGDRTPGDEGSYPDDDLQAALVEGKWKFVHKNGAPYR*