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PLM4_5_b1_sep16_Nitrosospira_multiformis_62_13

PLM4_5cm_b1_sep2016_Betaproteobacteria_62_13
In projects: PLM4_5cm_b1_sep2016  |  ERML-PLM4  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p

Consensus taxonomy: Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 201-250 of 1095 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM4_5_b1_sep16_scaffold_3407
Class: Betaproteobacteria (83.33%)
6 7142 bp 64.79 16.09 86.07
PLM4_5_b1_sep16_scaffold_10740 10 7137 bp 59.74 12.53 82.72
PLM4_5_b1_sep16_scaffold_7749
Class: Betaproteobacteria (100%)
9 7136 bp 64.25 14.76 92.45
PLM4_5_b1_sep16_scaffold_3452
Class: Betaproteobacteria (87.5%)
8 7101 bp 63.24 14.98 90.20
PLM4_5_b1_sep16_scaffold_24041
Class: Betaproteobacteria (80%)
10 7096 bp 62.26 13.61 84.81
PLM4_5_b1_sep16_scaffold_3471
Class: Betaproteobacteria (80%)
10 7080 bp 60.65 10.78 89.32
PLM4_5_b1_sep16_scaffold_9216
Class: Betaproteobacteria (88.89%)
9 7064 bp 61.38 6.48 96.74
PLM4_5_b1_sep16_scaffold_3997
Class: Betaproteobacteria (100%)
7 7047 bp 59.29 18.22 88.59
PLM4_5_b1_sep16_scaffold_19275
Phylum: Proteobacteria (57.14%)
7 7042 bp 59.20 14.48 58.70
PLM4_5_b1_sep16_scaffold_9271
Class: Betaproteobacteria (69.23%)
13 7028 bp 63.28 11.97 84.43
PLM4_5_b1_sep16_scaffold_3531
Order: Burkholderiales (50%)
6 7023 bp 60.53 12.09 81.46
PLM4_5_b1_sep16_scaffold_11332
Class: Betaproteobacteria (71.43%)
7 7021 bp 62.14 11.92 85.50
PLM4_5_b1_sep16_scaffold_4380
Class: Betaproteobacteria (50%)
6 7009 bp 58.57 11.19 61.08
PLM4_5_b1_sep16_scaffold_44147
Species: RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated (50%)
8 7006 bp 60.12 15.18 77.98
PLM4_5_b1_sep16_scaffold_12901
Class: Betaproteobacteria (100%)
7 7000 bp 57.99 9.58 76.80
PLM4_5_b1_sep16_scaffold_3562
Class: Betaproteobacteria (60%)
10 6989 bp 59.14 15.39 82.24
PLM4_5_b1_sep16_scaffold_9948
Phylum: Proteobacteria (100%)
7 6962 bp 61.53 12.75 73.08
PLM4_5_b1_sep16_scaffold_8764
Species: R_Betaproteobacteria_67_26 (50%)
6 6959 bp 60.27 14.70 87.64
PLM4_5_b1_sep16_scaffold_3591
Species: R_Betaproteobacteria_64_14 (57.14%)
7 6955 bp 61.12 13.09 82.47
PLM4_5_b1_sep16_scaffold_6570
Class: Betaproteobacteria (88.89%)
9 6954 bp 61.55 13.27 95.08
PLM4_5_b1_sep16_scaffold_3613
Species: uncultured bacterium CSL132 (66.67%)
6 6935 bp 53.29 13.02 60.22
PLM4_5_b1_sep16_scaffold_3621
Class: Betaproteobacteria (85.71%)
7 6931 bp 62.66 16.86 93.54
PLM4_5_b1_sep16_scaffold_3622
Class: Betaproteobacteria (100%)
9 6927 bp 61.69 14.12 90.21
PLM4_5_b1_sep16_scaffold_4076
Class: Betaproteobacteria (85.71%)
7 6903 bp 64.57 15.86 85.44
PLM4_5_b1_sep16_scaffold_4113
Order: Burkholderiales (50%)
6 6889 bp 63.70 16.11 84.96
PLM4_5_b1_sep16_scaffold_3671
Phylum: Proteobacteria (57.14%)
7 6877 bp 62.16 16.25 94.31
PLM4_5_b1_sep16_scaffold_25282
Class: Betaproteobacteria (100%)
7 6863 bp 59.33 14.27 92.71
PLM4_5_b1_sep16_scaffold_4231
Species: RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated (50%)
8 6851 bp 64.38 12.57 89.81
PLM4_5_b1_sep16_scaffold_11463
Class: Betaproteobacteria (50%)
8 6848 bp 56.63 10.80 86.30
PLM4_5_b1_sep16_scaffold_21097
Class: Betaproteobacteria (87.5%)
8 6846 bp 64.91 13.19 96.67
PLM4_5_b1_sep16_scaffold_3705
Class: Betaproteobacteria (100%)
6 6844 bp 62.35 17.16 82.50
PLM4_5_b1_sep16_scaffold_3967
Class: Betaproteobacteria (83.33%)
6 6837 bp 61.01 15.62 77.40
PLM4_5_b1_sep16_scaffold_5499
Phylum: Proteobacteria (62.5%)
8 6833 bp 58.10 9.75 84.60
PLM4_5_b1_sep16_scaffold_3718
Class: Betaproteobacteria (87.5%)
8 6833 bp 62.65 14.47 92.42
PLM4_5_b1_sep16_scaffold_3723
Phylum: Proteobacteria (88.89%)
9 6831 bp 62.52 14.43 94.20
PLM4_5_b1_sep16_scaffold_12660
Class: Betaproteobacteria (63.64%)
11 6825 bp 60.86 15.89 89.70
PLM4_5_b1_sep16_scaffold_7893
Phylum: Proteobacteria (60%)
10 6824 bp 60.96 13.65 93.02
PLM4_5_b1_sep16_scaffold_18503
Class: Betaproteobacteria (71.43%)
7 6792 bp 62.53 13.89 89.49
PLM4_5_b1_sep16_scaffold_3784
Class: Betaproteobacteria (60%)
5 6783 bp 64.44 16.65 88.77
PLM4_5_b1_sep16_scaffold_3786
Class: Betaproteobacteria (100%)
6 6780 bp 62.48 14.20 93.10
PLM4_5_b1_sep16_scaffold_3799
Class: Betaproteobacteria (62.5%)
8 6771 bp 63.95 13.34 96.63
PLM4_5_b1_sep16_scaffold_11450
Phylum: Proteobacteria (57.14%)
7 6770 bp 59.25 16.26 72.76
PLM4_5_b1_sep16_scaffold_6126
Order: Burkholderiales (57.14%)
7 6770 bp 63.34 16.91 93.68
PLM4_5_b1_sep16_scaffold_14557
Class: Betaproteobacteria (62.5%)
8 6763 bp 56.50 18.59 65.25
PLM4_5_b1_sep16_scaffold_10505
Class: Betaproteobacteria (100%)
7 6726 bp 63.59 12.69 97.06
PLM4_5_b1_sep16_scaffold_3868
Species: RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated (50%)
6 6709 bp 61.60 14.96 87.33
PLM4_5_b1_sep16_scaffold_3927
Phylum: Proteobacteria (75%)
8 6666 bp 58.72 7.67 85.91
PLM4_5_b1_sep16_scaffold_18538
Class: Alphaproteobacteria (71.43%)
7 6663 bp 62.54 14.39 89.28
PLM4_5_b1_sep16_scaffold_10962
Species: Ramlibacter tataouinensis (66.67%)
9 6663 bp 57.48 9.86 93.29
PLM4_5_b1_sep16_scaffold_3963
Class: Betaproteobacteria (71.43%)
7 6639 bp 62.78 14.32 91.96
Displaying items 201-250 of 1095 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.