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PLM4_32_b1_sep16_scaffold_11704

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_11704_1
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1..1431
DNA (1431bp) protein (477aa)
Peptidase S45 penicillin amidase bin=GWD2_Deltaproteobacteria_55_8 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
peptidase S45 penicillin amidase
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_32_b1_sep16_scaffold_11704_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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1504..2196
DNA (693bp) protein (231aa)
Response regulator, LuxR family bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
two component LuxR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_32_b1_sep16_scaffold_11704_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2290..2496
DNA (207bp) protein (69aa)
Cytochrome c biogenesis (Thiol:disulfide interchange protein) bin=GWD2_Deltaproteobacteria_55_8 species=Oceanobacillus iheyensis genus=Oceanobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
cytochrome c biogenesis
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_32_b1_sep16_scaffold_11704_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2648..3100
DNA (453bp) protein (151aa)
Cytochrome c, class II Tax=alpha proteobacterium BAL199 RepID=A8TMV7_9PROT
cytochrome C
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_32_b1_sep16_scaffold_11704_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3255..4094
DNA (840bp) protein (280aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_32_b1_sep16_scaffold_11704_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4054..4344
DNA (291bp) protein (97aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_32_b1_sep16_scaffold_11704_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4373..5350)
DNA (978bp) protein (326aa)
hemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase bin=GWC2_Nitrospirae-rel_56_14 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_32_b1_sep16_scaffold_11704_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5356..6195)
DNA (840bp) protein (280aa)
Uroporphyrin-III C-methyltransferase Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8ACV9_THEID
uroporphyrin-III C-methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_32_b1_sep16_scaffold_11704_9
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6218..7129)
DNA (912bp) protein (304aa)
porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_32_b1_sep16_scaffold_11704_10
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7183..7635)
DNA (453bp) protein (151aa)
Glutamyl-tRNA reductase bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
glutamyl-tRNA reductase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Displaying 10 items

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