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PLM4_32_b1_sep16_scaffold_7674

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_7674_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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1..669
DNA (669bp) protein (223aa)
Sodium ion-translocating decarboxylase, beta subunit bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
sodium ion-translocating decarboxylase, beta subunit
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_32_b1_sep16_scaffold_7674_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

670..2067
DNA (1398bp) protein (466aa)
Propionyl-CoA carboxylase bin=GWD2_Deltaproteobacteria_55_8 species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
carboxyl transferase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_32_b1_sep16_scaffold_7674_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2121..3731)
DNA (1611bp) protein (537aa)
Two-component hybrid sensor and regulator Tax=Bdellovibrio bacteriovorus str. Tiberius RepID=K7YTH0_BDEBC
two-component hybrid sensor and regulator
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_32_b1_sep16_scaffold_7674_4
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(3737..4162)
DNA (426bp) protein (142aa)
CheY-like response regulator Tax=Candidatus Nitrospira defluvii RepID=D8PHL0_9BACT
CheY-like response regulator
CheY-like response regulator {ECO:0000313|EMBL:CBK42747.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM4_32_b1_sep16_scaffold_7674_5
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(4211..5116)
DNA (906bp) protein (302aa)
putative sensor histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CBK42746.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Putative Sensor histidine kinase Tax=Candidatus Nitrospira defluvii RepID=D8PHK9_9BACT
PLM4_32_b1_sep16_scaffold_7674_6
unknown

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5519..6085
DNA (567bp) protein (189aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_7674_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6128..7999)
DNA (1872bp) protein (624aa)
Multi-sensor signal transduction histidine kinase Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YI85_9SPHI
multi-sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_32_b1_sep16_scaffold_7674_8
CSP1_5_NC10, NC10, Bacteria

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comp(7987..8547)
DNA (561bp) protein (187aa)
two-component hybrid sensor and regulator bin=bin3_NC10 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
sensor protein
Tax=CSP1_5_NC10
PLM4_32_b1_sep16_scaffold_7674_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9184..10296)
DNA (1113bp) protein (371aa)
Putative Sensor protein bin=GWD2_Deltaproteobacteria_55_8 species=Pseudanabaena biceps genus=Pseudanabaena taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative signal transduction histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_32_b1_sep16_scaffold_7674_10
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10293..10514)
DNA (222bp) protein (74aa)
Putative excisionase Tax=uncultured bacterium RepID=A1Y2T6_9BACT
DNA-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_32_b1_sep16_scaffold_7674_11
unknown

Not on your lists

10544..10720
DNA (177bp) protein (59aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_7674_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10638..12338)
DNA (1701bp) protein (567aa)
Molybdenum cofactor synthesis domain protein Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RCS9_AMMDK
LysR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_32_b1_sep16_scaffold_7674_13
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12331..12702)
DNA (372bp) protein (124aa)
Molybdenum cofactor synthesis domain protein Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A5V0_NATTJ
molybdenum cofactor synthesis domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_32_b1_sep16_scaffold_7674_14
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12702..13940)
DNA (1239bp) protein (413aa)
Molybdenum cofactor synthesis domain protein Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NIU4_DESAR
molybdenum cofactor synthesis domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_32_b1_sep16_scaffold_7674_15
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14132..15079
DNA (948bp) protein (316aa)
id=1940952 bin=GWD2_Deltaproteobacteria_55_8 species=Mycobacterium smegmatis genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_32_b1_sep16_scaffold_7674_16
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15130..15441
DNA (312bp) protein (104aa)
hypothetical protein Tax=Pusillimonas noertemannii RepID=UPI000300DDD9
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 16 items

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