ggKbase home page

PLM4_32_b1_sep16_scaffold_18790

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_18790_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..148
DNA (147bp) protein (49aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_32_b1_sep16_scaffold_18790_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

145..1263
DNA (1119bp) protein (373aa)
hypothetical protein bin=bin1_lowGC species=Aquifex aeolicus genus=Aquifex taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin1_lowGC organism_group=Unknown_CP
NADP-dependent oxidoreductase domain protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_32_b1_sep16_scaffold_18790_3
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(1268..1615)
DNA (348bp) protein (116aa)
Putative aldo/keto reductase family protein bin=GWD2_Deltaproteobacteria_55_8 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
aldo/keto reductase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM4_32_b1_sep16_scaffold_18790_4
unknown

Not on your lists

1695..2210
DNA (516bp) protein (172aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_18790_5
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2329..2784)
DNA (456bp) protein (152aa)
Thioesterase superfamily bin=GWD2_Deltaproteobacteria_55_8 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
thioesterase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_32_b1_sep16_scaffold_18790_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2800..3195)
DNA (396bp) protein (132aa)
protein-methionine-S-oxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrB bin=GWD2_Deltaproteobacteria_55_8 species=Nitrosospira multiformis genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM4_32_b1_sep16_scaffold_18790_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3448..3939)
DNA (492bp) protein (164aa)
UPF0234 protein DvMF_3058 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_32_b1_sep16_scaffold_18790_8
unknown

Not on your lists

4306..4554
DNA (249bp) protein (83aa)

This feature has no annotations

Displaying 8 items

View Taxonomy