ggKbase home page

PLM4_32_b1_sep16_scaffold_5448

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_5448_1
unknown

Not on your lists

comp(126..491)
DNA (366bp) protein (122aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_5448_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(605..1453)
DNA (849bp) protein (283aa)
Lipoyl synthase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TJJ6_9CHLR
lipA; lipoyl synthase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_32_b1_sep16_scaffold_5448_3
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1455..2171)
DNA (717bp) protein (239aa)
Probable octanoyltransferase bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
lipoate-protein ligase B
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_32_b1_sep16_scaffold_5448_4
unknown

Not on your lists

comp(2530..3060)
DNA (531bp) protein (177aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_5448_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3388..4434
DNA (1047bp) protein (349aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_32_b1_sep16_scaffold_5448_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4496..4852
DNA (357bp) protein (119aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_32_b1_sep16_scaffold_5448_7
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4893..5519)
DNA (627bp) protein (209aa)
Phosphoglycerate mutase bin=GWD2_Deltaproteobacteria_55_8 species=Thermovibrio ammonificans genus=Thermovibrio taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
phosphoglycerate mutase
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_32_b1_sep16_scaffold_5448_8
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5552..7462)
DNA (1911bp) protein (637aa)
PpiC-type peptidyl-prolyl cis-trans isomerase bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
PpiC-type peptidyl-prolyl cis-trans isomerase
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_32_b1_sep16_scaffold_5448_9
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7655..8689
DNA (1035bp) protein (345aa)
Rod shape-determining protein MreB bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
mreB; rod shape-determining protein MreB
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_32_b1_sep16_scaffold_5448_10
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8740..9411
DNA (672bp) protein (224aa)
Cell shape-determining protein MreC bin=GWD2_Deltaproteobacteria_55_8 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rod shape-determining protein MreC
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_32_b1_sep16_scaffold_5448_11
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9408..9911
DNA (504bp) protein (168aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_32_b1_sep16_scaffold_5448_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9920..11371
DNA (1452bp) protein (484aa)
Penicillin-binding protein 2 bin=GWC2_Deltaproteobacteria_42_51 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
cell elongation specific D,D-transpeptidase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 12 items

View Taxonomy