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PLM4_32_b1_sep16_scaffold_6296

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_6296_1
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

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comp(1..840)
DNA (840bp) protein (280aa)
Transcriptional regulatory protein pilR bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
sigma-54-dependent transcriptional response regulator
Tax=RBG_16_Acidobacteria_68_9_curated
PLM4_32_b1_sep16_scaffold_6296_2
unknown

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comp(937..2010)
DNA (1074bp) protein (358aa)
Integral membrane sensor signal transduction histidine kinase Tax=Streptomyces flavogriseus (strain ATCC 33331 / DSM 40990 / IAF-45CD) RepID=E8W620_STRFA
integral membrane sensor signal transduction histidine kinase
PLM4_32_b1_sep16_scaffold_6296_3
RLO_RIF03_38_15, RIF3, Bacteria

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2915..4339
DNA (1425bp) protein (475aa)
Acetoacetate metabolism regulatory protein atoC bin=GWA2_OP3_52_12 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Fis family two component sigma54 specific transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
PLM4_32_b1_sep16_scaffold_6296_4
R_Nitrospinae_39_10, Nitrospinae, Bacteria

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4320..5702
DNA (1383bp) protein (461aa)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose/GDP-mannose dehydrogenase Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LFS6_9BACT
Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
PLM4_32_b1_sep16_scaffold_6296_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5786..7033)
DNA (1248bp) protein (416aa)
Protein translocase subunit SecA Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C826_DESTA
protein translocase subunit secA
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Displaying 5 items

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