ggKbase home page

PLM4_32_b1_sep16_scaffold_1453

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_1453_1
unknown

Not on your lists

comp(2..121)
DNA (120bp) protein (40aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1453_2
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(228..2159)
DNA (1932bp) protein (644aa)
Uncharacterized protein Tax=Rhodospirillum rubrum RepID=Q2RPZ4_RHORT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC23801.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
PLM4_32_b1_sep16_scaffold_1453_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2216..3550)
DNA (1335bp) protein (445aa)
hypothetical protein SclubJA_09585 bin=GWC2_Nitrospirae-rel_56_14 species=SAR324 cluster bacterium JCVI-SC AAA005 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
Tax=RBG_16_Gamma2_65_34_curated
PLM4_32_b1_sep16_scaffold_1453_4
unknown

Not on your lists

3746..3967
DNA (222bp) protein (74aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1453_5
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4040..5776
DNA (1737bp) protein (579aa)
putative undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase (arnT) (EC:2.-.-.-)
Putative undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase (ArnT) Tax=Ralstonia solanacearum CFBP2957 RepID=D8P5B6_RALSL
Tax=GWA2_Gallionellales_60_18_curated
PLM4_32_b1_sep16_scaffold_1453_6
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5781..7184)
DNA (1404bp) protein (468aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
Sensor histidine kinase Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q607J4_METCA
sensor histidine kinase
PLM4_32_b1_sep16_scaffold_1453_7
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7181..7852)
DNA (672bp) protein (224aa)
transcriptional regulator Tax=Uliginosibacterium gangwonense RepID=UPI00036AEB09
basR; two-component response regulatory protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_32_b1_sep16_scaffold_1453_8
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8131..8304
DNA (174bp) protein (58aa)
Isoquinoline 1-oxidoreductase beta subunit Tax=Bradyrhizobium sp. ORS 285 RepID=H0RXF0_9BRAD
isoquinoline 1-oxidoreductase beta subunit
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_32_b1_sep16_scaffold_1453_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8316..8786
DNA (471bp) protein (157aa)
Cytochrome c Tax=Polaromonas sp. CF318 RepID=J2UHC5_9BURK
cytochrome C
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_32_b1_sep16_scaffold_1453_10
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8783..9262
DNA (480bp) protein (160aa)
sulfur oxidation protein SoxY Tax=Bradyrhizobium japonicum RepID=UPI00035E28AD
sulfur oxidation protein SoxY
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_32_b1_sep16_scaffold_1453_11
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9263..9475
DNA (213bp) protein (71aa)
sulfur oxidation protein Tax=Bradyrhizobium elkanii RepID=UPI0003155BE5
soxZ; sulfur compound chelating protein SoxZ
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Displaying 11 items

View Taxonomy