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PLM4_32_b1_sep16_scaffold_4560

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_4560_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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1..717
DNA (717bp) protein (239aa)
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein bin=bin7_NC10_sister species=Acidovorax ebreus genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
branched chain amino acid ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_32_b1_sep16_scaffold_4560_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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800..1612
DNA (813bp) protein (271aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein bin=bin7_NC10_sister species=Pseudomonas fluorescens genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter permease
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_32_b1_sep16_scaffold_4560_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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1625..2572
DNA (948bp) protein (316aa)
livM; putative ABC transport system, membrane protein bin=bin7_NC10_sister species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
branched-chain amino acid transport system / permease component family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_32_b1_sep16_scaffold_4560_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2545..3294
DNA (750bp) protein (250aa)
Putative branched-chain amino acid ABC transporter, ATP-binding protein bin=GWF2_Methylomirabilis_70_14 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched-chain amino acid ABC transporter ATP-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_4560_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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3291..3986
DNA (696bp) protein (232aa)
ABC transporter related bin=GWC2_Methylomirabilis_70_24 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_32_b1_sep16_scaffold_4560_6
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

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4043..4330
DNA (288bp) protein (96aa)
Uncharacterized protein Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GYE9_CUPNN
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_32_b1_sep16_scaffold_4560_7
Burkholderia sp. CCGE1002, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4495..5475)
DNA (981bp) protein (327aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00036A838D
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADG19849.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1002).;"
PLM4_32_b1_sep16_scaffold_4560_8
R_RIF_OD1_07_49_22b, RIF-OD1-7, Parcubacteria, Bacteria

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5562..6149
DNA (588bp) protein (196aa)
Methyltransferase Tax=uncultured Acidobacteria bacterium A11 RepID=F8TTK8_9BACT
type 11 methyltransferase
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_07_49_22b_curated
PLM4_32_b1_sep16_scaffold_4560_9
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

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6146..6292
DNA (147bp) protein (49aa)
Methyltransferase bin=GWA1_ZB2_49_26 species=uncultured Acidobacteria bacterium A11 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
type 11 methyltransferase
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
PLM4_32_b1_sep16_scaffold_4560_10
unknown

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6334..6735
DNA (402bp) protein (134aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_4560_11
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6782..7057)
DNA (276bp) protein (92aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta Tax=mine drainage metagenome RepID=T0YFS0_9ZZZZ
2-oxoglutarate ferredoxin oxidoreductase subunit beta
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Displaying 11 items

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