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PLM4_32_b1_sep16_scaffold_2188

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_2188_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

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18..401
DNA (384bp) protein (128aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI000382DC13
SURF4 domain protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM4_32_b1_sep16_scaffold_2188_2
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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498..1370
DNA (873bp) protein (291aa)
Taurine dioxygenase Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3UGA1_ADVKW
taurine dioxygenase
Taurine dioxygenase {ECO:0000313|EMBL:AFK64039.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001); (Tetrathiobacter kashmirensis).;"
PLM4_32_b1_sep16_scaffold_2188_3
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1367..2287
DNA (921bp) protein (307aa)
ureidoglycolate lyase (EC:4.3.2.3)
Ureidoglycolate lyase {ECO:0000313|EMBL:AEI82347.1}; EC=4.3.2.3 {ECO:0000313|EMBL:AEI82347.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
Ureidoglycolate lyase Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GUE3_CUPNN
PLM4_32_b1_sep16_scaffold_2188_4
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2301..3269
DNA (969bp) protein (323aa)
Putative uncharacterized protein Tax=Achromobacter xylosoxidans C54 RepID=E5UDU6_ALCXX
ABC transporter substrate-binding protein
Argininosuccinate lyase {ECO:0000313|EMBL:CKG90902.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
PLM4_32_b1_sep16_scaffold_2188_5
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

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3266..4423
DNA (1158bp) protein (386aa)
(S)-mandelate dehydrogenase (EC:1.1.99.31)
(S)-mandelate dehydrogenase Tax=Burkholderia sp. CCGE1001 RepID=E8YNX7_9BURK
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_32_b1_sep16_scaffold_2188_6
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4556..4966
DNA (411bp) protein (137aa)
Predicted membrane protein Tax=gamma proteobacterium HdN1 RepID=E1VJW8_9GAMM
Membrane protein with DUF350 domain
Membrane protein with DUF350 domain {ECO:0000313|EMBL:AIY40399.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
PLM4_32_b1_sep16_scaffold_2188_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4986..5954
DNA (969bp) protein (323aa)
Uncharacterized protein Tax=Ralstonia sp. PBA RepID=I9W8U2_9RALS
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_32_b1_sep16_scaffold_2188_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5951..7351
DNA (1401bp) protein (467aa)
hypothetical protein Tax=Wenxinia marina RepID=UPI00037973E9
mmgE/PrpD family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_32_b1_sep16_scaffold_2188_9
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7348..8307
DNA (960bp) protein (320aa)
Uncharacterized protein Tax=Alicycliphilus denitrificans RepID=E8U1X5_ALIDB
Uncharacterized protein {ECO:0000313|EMBL:KDP87440.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_2188_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8345..9304
DNA (960bp) protein (320aa)
Uncharacterized protein Tax=alpha proteobacterium BAL199 RepID=A8U3A2_9PROT
dihydrodipicolinate synthase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_32_b1_sep16_scaffold_2188_11
Roseobacter litoralis, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9369..10277
DNA (909bp) protein (303aa)
Putative regulcalcin Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZKG7_ROSLO
regulcalcin
Putative regulcalcin {ECO:0000313|EMBL:AEI95181.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC; 15278 / OCh 149).;"
PLM4_32_b1_sep16_scaffold_2188_12
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10395..11048
DNA (654bp) protein (218aa)
Transcriptional regulator, Crp/Fnr family Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K7C8_NITWC
Crp/Fnr family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM4_32_b1_sep16_scaffold_2188_13
unknown

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comp(11177..11371)
DNA (195bp) protein (65aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_2188_14
unknown

Not on your lists

comp(11551..11718)
DNA (168bp) protein (56aa)

This feature has no annotations

Displaying 14 items

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