ggKbase home page

PLM4_32_b1_sep16_scaffold_424

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_424_1
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..407
DNA (405bp) protein (135aa)
short chain dehydrogenase (EC:1.-.-.-)
hypothetical protein Tax=Endozoicomonas elysicola RepID=UPI00037CBE72
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_32_b1_sep16_scaffold_424_2
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

414..2402
DNA (1989bp) protein (663aa)
Putative TIM-barrel fold metal-dependent hydrolase Tax=Caulobacter sp. AP07 RepID=J3AM66_9CAUL
aepA; Exoenzymes regulatory protein AepA precursor
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM4_32_b1_sep16_scaffold_424_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2425..3405
DNA (981bp) protein (327aa)
Uncharacterized protein Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SHX3_THEM7
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_32_b1_sep16_scaffold_424_4
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3456..4379)
DNA (924bp) protein (308aa)
lepB; LepB protein (EC:3.4.21.89)
hypothetical protein Tax=Methyloversatilis universalis RepID=UPI00036E087F
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
PLM4_32_b1_sep16_scaffold_424_5

Not on your lists

comp(4386..5297)
DNA (912bp) protein (304aa)
TfdA-like protein (Fragment) Tax=uncultured bacterium RepID=D3JH54_9BACT
TfdA-like protein {ECO:0000313|EMBL:ADC33999.1}; Flags: Fragment;; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Taurine catabolism dioxygenase TauD/TfdA
PLM4_32_b1_sep16_scaffold_424_6
beta proteobacterium CB, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5302..6264)
DNA (963bp) protein (321aa)
Putative exported protein Tax=beta proteobacterium CB RepID=M1SFI2_9PROT
hypothetical protein
Putative exported protein {ECO:0000313|EMBL:AGG33154.1}; species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="beta proteobacterium CB.;"
PLM4_32_b1_sep16_scaffold_424_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6277..7200)
DNA (924bp) protein (308aa)
SMP-30/Gluconolaconase/LRE domain protein Tax=beta proteobacterium CB RepID=M1SU42_9PROT
SMP-30/Gluconolaconase/LRE domain protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_32_b1_sep16_scaffold_424_8
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7272..7985)
DNA (714bp) protein (238aa)
ABC transporter-like protein Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT63_9RHIZ
ABC transporter ATP-binding protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_32_b1_sep16_scaffold_424_9
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7978..8754)
DNA (777bp) protein (259aa)
Branched-chain amino acid ABC transporter ATP-binding protein Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT64_9RHIZ
hemolysin III
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM4_32_b1_sep16_scaffold_424_10
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8751..9749)
DNA (999bp) protein (333aa)
Branched-chain amino acid ABC transporter permease Tax=Herbaspirillum frisingense GSF30 RepID=R0EL06_9BURK
branched-chain amino acid ABC transport system permease
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM4_32_b1_sep16_scaffold_424_11
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9749..10609)
DNA (861bp) protein (287aa)
Branched-chain amino acid ABC transport system permease Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT67_9RHIZ
High-affinity branched-chain amino acid transport system permease protein LivH
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM4_32_b1_sep16_scaffold_424_12
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10740..11912)
DNA (1173bp) protein (391aa)
Branched-chain amino acid ABC transporter periplasmic protein Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT68_9RHIZ
extracellular ligand-binding receptor
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM4_32_b1_sep16_scaffold_424_13
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12082..12516
DNA (435bp) protein (145aa)
GlcG protein Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SW64_JANMA
glcG1; GlcG protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_32_b1_sep16_scaffold_424_14
unknown

Not on your lists

comp(12552..12920)
DNA (369bp) protein (123aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_424_15
Comamonas sp. 7D-2, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12956..14137)
DNA (1182bp) protein (394aa)
BhbF2 Tax=Comamonas sp. 7D-2 RepID=L7SSV1_9BURK
BhbF2 {ECO:0000313|EMBL:AGJ70668.1}; Putative 4-hydroxybenzoate 3-monooxygenase {ECO:0000313|EMBL:AGC22537.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas sp. 7D-2.;"
4-hydroxybenzoate 3-monooxygenase
PLM4_32_b1_sep16_scaffold_424_16
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14349..14708)
DNA (360bp) protein (120aa)
Extradiol ring-cleavage dioxygenase, class III protein Tax=Azotobacter vinelandii RepID=C1DNC2_AZOVD
protocatechuate 4,5-dioxygenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM4_32_b1_sep16_scaffold_424_17
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14705..15643)
DNA (939bp) protein (313aa)
Protocatechuate 3,4-dioxygenase subunit beta Tax=Pandoraea RepID=V5UGE0_9BURK
protocatechuate 3,4-dioxygenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_32_b1_sep16_scaffold_424_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15657..16547)
DNA (891bp) protein (297aa)
Uncharacterized protein Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12H31_POLSJ
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM4_32_b1_sep16_scaffold_424_19
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16544..17167)
DNA (624bp) protein (208aa)
Uncharacterized protein Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HFL2_ACHXA
Uncharacterized protein {ECO:0000313|EMBL:KGY24598.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_424_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17174..18697)
DNA (1524bp) protein (508aa)
fumarase (EC:4.2.1.2)
fumarate hydratase Tax=Burkholderia kururiensis RepID=UPI00034CB9E8
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM4_32_b1_sep16_scaffold_424_21
unknown

Not on your lists

comp(18708..18812)
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying 21 items

View Taxonomy