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PLM4_32_b1_sep16_scaffold_3186

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_3186_1
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..241)
DNA (240bp) protein (80aa)
Cytochrome c family protein bin=GWF2_Bacteroidetes_49_14 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
cytochrome C family protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM4_32_b1_sep16_scaffold_3186_2
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

706..1689
DNA (984bp) protein (328aa)
Decaheme c-type cytochrome, DmsE family bin=GWA1_Deltaproteobacteria_52_35 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
decaheme c-type cytochrome, DmsE family
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_32_b1_sep16_scaffold_3186_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1700..3850
DNA (2151bp) protein (717aa)
id=3181943 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_32_b1_sep16_scaffold_3186_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3953..4243
DNA (291bp) protein (97aa)
cytochrome C Tax=Methylotenera RepID=UPI00037C245A
class I cytochrome c
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_32_b1_sep16_scaffold_3186_5
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4254..4844)
DNA (591bp) protein (197aa)
Hemerythrin HHE cation binding domain protein Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y4N9_LEPCP
hemerythrin HHE cation-binding region
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_32_b1_sep16_scaffold_3186_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5207..5878
DNA (672bp) protein (224aa)
Uncharacterized protein Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y364_RAMTT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_32_b1_sep16_scaffold_3186_7
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5920..7236)
DNA (1317bp) protein (439aa)
Primary replicative DNA helicase Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7M9_NITMU
replicative DNA helicase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM4_32_b1_sep16_scaffold_3186_8
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7394..7852)
DNA (459bp) protein (153aa)
50S ribosomal protein L9 Tax=Nitrosospira sp. APG3 RepID=M5DKW2_9PROT
50S ribosomal protein L9
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM4_32_b1_sep16_scaffold_3186_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7863..8174)
DNA (312bp) protein (104aa)
Putative 30S ribosomal protein S18 RpsR Tax=mine drainage metagenome RepID=E6QSQ5_9ZZZZ
rpsR; 30S ribosomal protein S18
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM4_32_b1_sep16_scaffold_3186_10
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8177..8467)
DNA (291bp) protein (97aa)
Primosomal replication protein n Tax=Sulfuricella denitrificans skB26 RepID=S6ACI3_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM4_32_b1_sep16_scaffold_3186_11
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8487..8906)
DNA (420bp) protein (140aa)
30S ribosomal protein S6 Tax=uncultured bacterium RepID=K2EF41_9BACT
rpsF; 30S ribosomal protein S6
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM4_32_b1_sep16_scaffold_3186_12
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(9248..10312)
DNA (1065bp) protein (355aa)
integrase Tax=Methylohalobius crimeensis RepID=UPI0003B4FFBC
integrase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying 12 items

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