ggKbase home page

PLM4_32_b1_sep16_scaffold_3401

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_3401_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1254
DNA (1254bp) protein (418aa)
Uncharacterized protein Tax=Lutibaculum baratangense AMV1 RepID=V4T7U9_9RHIZ
sigma-70 region 3 domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_32_b1_sep16_scaffold_3401_2
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1251..1784)
DNA (534bp) protein (178aa)
Putative acetyltransferase Tax=Thioflavicoccus mobilis 8321 RepID=L0GR79_9GAMM
acetyltransferase
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_32_b1_sep16_scaffold_3401_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1774..2043)
DNA (270bp) protein (90aa)
Putative uncharacterized protein Tax=Thiorhodococcus drewsii AZ1 RepID=G2E7K1_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_32_b1_sep16_scaffold_3401_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2114..2398)
DNA (285bp) protein (95aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKH2_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM4_32_b1_sep16_scaffold_3401_5
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(2755..3222)
DNA (468bp) protein (156aa)
LysR family transcriptional regulator Tax=Acidovorax sp. MR-S7 RepID=UPI000370DE68
DoxX family protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM4_32_b1_sep16_scaffold_3401_6
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(3288..3842)
DNA (555bp) protein (185aa)
Uncharacterized protein Tax=Janthinobacterium sp. HH01 RepID=L9PE20_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM4_32_b1_sep16_scaffold_3401_7
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3984..4901
DNA (918bp) protein (306aa)
Putative transcriptional regulator Tax=Collimonas fungivorans (strain Ter331) RepID=G0AER6_COLFT
putative transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM4_32_b1_sep16_scaffold_3401_8
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5013..5540)
DNA (528bp) protein (176aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Methylobacter tundripaludum SV96 RepID=G3J1H1_9GAMM
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_32_b1_sep16_scaffold_3401_9
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5659..6153)
DNA (495bp) protein (165aa)
Hemerythrin HHE cation binding domain protein Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VC69_RHOPX
hemerythrin HHE cation-binding domain-containing protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_32_b1_sep16_scaffold_3401_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6173..6313)
DNA (141bp) protein (47aa)
Phenylacetate-CoA ligase (EC:6.2.1.30)
Phenylacetate-CoA ligase Tax=Rhodospirillum photometricum DSM 122 RepID=H6SJ73_RHOPH
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
Displaying 10 items

View Taxonomy